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Record W7133290172

Pacific Herring Operating Model Update

2023· other· en· W7133290172 on OpenAlexaboutno aff
Fisheries and Oceans Canada, Pêches et Océans Canada

Bibliographic record

VenueFederal Open Science Repository of Canada / Le Dépôt fédéral de science ouverte du Canada · 2023
Typeother
Languageen
Field
Topic
Canadian institutionsnot available
Fundersnot available
KeywordsHerringWeightingPopulationStatistical modelPacific herringStock assessmentEstimationGoodness of fitVital rates
DOInot available

Abstract

fetched live from OpenAlex

A purpose-built statistical catch-at-age model was presented with the following features: flexibility in modelling natural mortality (M), a method for integrating data from surface and dive surveys in estimation of the survey index, representation of timing of all fisheries throughout the year, inclusion of spawn-on-kelp (SOK) fisheries, and an age-composition likelihood function that captures correlation among ages. The new model is a spatially integrated statistical catch-at-age herring (SISCAH) model, however the spatial capabilities of the model were not used here. SISCAH was compared to the previous assessment model with a transition analysis, using data through 2022. Suitability of SISCAH as an assessment model for the five major Pacific Herring stocks was evaluated using common statistical metrics including goodness of fit, simulation self-tests, retrospective analyses, and sensitivity tests. Trends in biomass, depletion, and recruitment were evaluated for each major stock. Utility of SISCAH as an operating model was evaluated by: i) conditioning on the historical time series (1951-2022), ii) projecting the population over a 15 year time frame, iii) applying example precautionary approach (PA) compliant management procedures to the projected population, and iv) evaluating performance against existing conservation and biomass objectives using closed loop simulations. Density-dependent natural mortality was added to represent potential ecosystem impacts (e.g., depensatory predation) on Pacific Herring stocks. Evidence for depensation in natural mortality varied among regions, and was strongest in Haida Gwaii (HG), Central Coast (CC), and West Coast Vancouver Island (WCVI), and weak in Prince Rupert District (PRD) and Strait of Georgia (SOG). Model fit was improved by introducing a weighting method for combining surface and dive survey indices within a single year, rather than the previous practice of treating post-1987 surface observations as coming from the dive survey only. SISCAH and the previous model show similar time series trends in biomass and recruitment. SISCAH natural mortality estimates match the previous model for HG and WCVI but appears to be constrained at lower levels of natural mortality for PRD, CC and SOG. SOK removals were included in the new model, represented as using closed ponding methods although representation using open ponding methods is also possible in future versions. Including these removals had little effect on biomass trends since ponding mortality is generally low, but yield curves were sensitive to allocation of quota among fisheries. As an operating model SISCAH reproduced historical population trends and simulated future trends and observational data consistent with the historical observations. Example management procedure evaluations were presented using perfect information simulations. Density-dependent natural mortality has stock-specific effects, affecting estimates of long term average unfished biomass and thus reference points, and consequently the perception of stock status over time. For example, stocks which show stronger evidence of depensation, such as HG, have lower estimates of long-term average unfished biomass which corresponds to lower limit reference points estimates. Equilibrium yield curves were produced using 200-year simulations and were the basis for maximum sustainable yield (MSY)-based reference point calculations. These curves were highly sensitive to the allocation of catch between fisheries; an allocation based on the recent-most 10-years historical average was used in this analysis (excluding years without fishing). Estimated harvest rate at MSY may be used to guide for tuning management procedure evaluations, for compliance with the PA policy reporting requirements, and for evaluation of proposed best practices for forage species. A minimum 3 year cycle for management strategy evaluation (MSE) updates is recommended, unless new evidence reveals exceptional circumstances. A process for implementing the new assessment and operating model, updates to the MSE, and identification of exceptional circumstances should be developed in a phased approach in consultation with managers, First Nations and stakeholders. Environmental variability was modelled implicitly via natural mortality dynamics (i.e., implicit predation), recruitment variability, and inter-annual variability in natural mortality around the depensatory relationship to biomass; however, specific advice on the impacts of climate change and changes to ocean productivity were not addressed in the analysis. Future work should include examining alternative parametrizations of density-dependent natural mortality, survey catchabilities, and spatial structure.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.892
Threshold uncertainty score0.214

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0030.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0180.006

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.241
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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Same venueFederal Open Science Repository of Canada / Le Dépôt fédéral de science ouverte du CanadaFrench-language works237,207