Uncertainty Aware Tri-Modal Fusion with Faithful Explainability for Five-Stage Alzheimer's Disease Classification
Bibliographic record
Abstract
Early and accurate staging of Alzheimer's disease (AD) is a significant facet of prognosis, clinical trial participation and treatment selection, but remains difficult because single modality approaches apply each input equally and do not capture complimentary biomarkers. Presented with this problem, we proposed an uncertainty-aware tri-modal framework that combines, (i) IBSI compliant radiomic features obtained from the hippocampus, ventricles and cortex, (ii) 3D Swin-UNet transformer embeddings that encodes the multi-scale atrophy patterns, and (iii) fine-grained cognitive scores from the Mini-Mental State Examination (MMSE) and the Montreal Cognitive Assessment (MoCA). Our model makes use of Monte-Carlo dropout to jointly estimate patient-specific epistemic uncertainty, which dynamically weights each mode of input through a gated self-attention mechanism, automatically eliminating the weight of noise from motion-corrupted Magnetic Resonance Imaging (MRI) or unreliable assessments measuring cognitive performance. The framework is evaluated on 1,080 individuals from ADNI, OASIS-3, and AIBL datasets and yields an average accuracy of <tex xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">$88.6 \pm 1.2 \%$</tex>, and average Macro F1 and MacroAUC of <tex xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">$86.4 \pm 1.3 \%$</tex> and 0.918 respectively across five AD stages, while also achieving 87.2 % accuracy on a completely independent multi-site test set. Importantly, these performance metrics are on par with or exceed state-of-the-art observation models, and are achieved using a low-cost T4 GPU in just <tex xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">$0.11 ~\mathrm{s} / \text{scan}$</tex>. Our model has a three-part explainability system using the transformers' saliency maps, the radiomic SHAP values, and the cognitive item attention weights, and demonstrates strong causal effort: perturbation of the voxels in the top- 10 % of saliency reduced confidence by 25 %, while masking the random regions had less than (<tex xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">$<5 \%$</tex>) effect on confidence. These results collectively indicate that uncertainty-aware multimodal fusion and rigorous validation for interpretability are imperative in creating clinically permissible AD stage systems.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.002 | 0.001 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.000 |
| Bibliometrics | 0.001 | 0.003 |
| Science and technology studies | 0.002 | 0.001 |
| Scholarly communication | 0.001 | 0.002 |
| Open science | 0.003 | 0.001 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".