MétaCan
Menu
Back to cohort
Record W7160946430 · doi:10.5206/wurjhns.2020-20.1

An Empirical Study of the Evolution of L-Type BSE Virulence Under Both Horizontal and Vertical Transmission

2022· article· W7160946430 on OpenAlexvenueno aff
Shiven Sharma

Bibliographic record

VenueWestern Undergraduate Research Journal Health and Natural Sciences · 2022
Typearticle
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicPrion Diseases and Protein Misfolding
Canadian institutionsnot available
FundersUniversity of Pennsylvania
KeywordsVirulenceHorizontal transmissionTransmission (telecommunications)Prion proteinVector (molecular biology)TransgeneBovine spongiform encephalopathyHorizontal and vertical

Abstract

fetched live from OpenAlex

Prion diseases are fatal neurodegenerative disorders caused by the misfolding of the cellular prion protein PrPC into pathogenic conformers PrPSc. Recent experimentation with the transgenic mice and the discovery of prion strains’ self-replicability opens an avenue to compare the virulence of prions transmitted horizontally with prions transmitted vertically in BSE models. The task of this review and proposal is to delineate the evolutionary relationship between prion vector and virulence. Similar to conventional wisdom, the hypothesis is that horizontally-transmitted prion strains will evolve to higher virulence whereas vertically-transmitted prion strains will evolve lower virulence. To corroborate this hypothesis, in vivo experimentation will take place; bovine transgenic mice infected with L-type BSE PrPSc strains will be tested under horizontal and vertical transmission. In the study, vector evolution will be shown through serial passage of these infected mice over four generations. The results should demonstrate the ability to specialize in either horizontal or vertical transmission and the subsequent inability to transmit in the opposite vector. The virulence associated with vector specialization will be characterized by mortality percentage and net Aβ plaque density percentage. The results should demonstrate increasing mortality and Aβ plaque density percentages in the horizontal model and decreasing mortality and Aβ plaque density percentages in the vertical model. The findings of this investigation will be significant because they will aid in formulating predictive models for treating zoonotic prion diseases, thus paving the way for human public health strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.011
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.011
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.049
GPT teacher head0.419
Teacher spread0.370 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

Explore more

Same venueWestern Undergraduate Research Journal Health and Natural SciencesSame topicPrion Diseases and Protein MisfoldingFrench-language works237,207