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Record W7161492504 · doi:10.5281/zenodo.20253676

Alpheus pacificus Dana 1852, sensu lato

2016· article· W7161492504 on OpenAlexaboutno aff
Arthur Anker, Sammy De Grave

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2016
Typearticle
Language
FieldBiochemistry, Genetics and Molecular Biology
TopicMarine Sponges and Natural Products
Canadian institutionsnot available
Fundersnot available
KeywordsSensuIntertidal zoneTaxonSpecies complexDNA barcodingBanner

Abstract

fetched live from OpenAlex

Alpheus pacificus Dana, 1852 sensu lato Alpheus pacificus Dana, 1852a: 21; Dana, 1852b: 544; De Man, 1911: 427; Tiwari, 1965: 315; Banner & Banner, 1966a: 143; Banner & Banner, 1978: 227; Banner & Banner, 1982: 217; Banner & Banner, 1985: 26; Chace, 1988: 45. (?) Alpheus gracilidigitus Miers, 1884: 287. CMBS material. None. Additional material. Strait of Singapore. 1 male, 1 ov. female, ZRC 2008.0634, Siglap, no further data, VI.1933; 1 male, ZRC 2000.1443, East Coast, leg. K.L. Yeo, 08 May 2000; 1 male, ZRC 2014.0654, Singapore sta. JL04 D206, VI.2004, no further data. Distribution. Indo-Pacific, from the Red Sea and South Africa to Japan, Korea, Indonesia, Australia, Hawaii, French Polynesia, Rapa Nui, Clipperton, Galapagos, and Mexico to Panama. Previous records from Singapore. None. Ecology. Rocky shores and mixed sand-rock-rubble bottoms in shallow water, usually under rocks or in dead corals, apparently preferring well-washed clean sands of beaches exposed to wave action; most common in intertidal and shallow subtidal, sometimes down to 20 m. Remarks. Variation in some morphological features and colour patterns in material identifiable as Alpheus pacificus (Banner & Banner, 1982; A. Anker, pers. obs.) suggest that this taxon is a complex of several cryptic species. Preliminary analyses of the barcoding part of the COI gene showed that A. pacificus is composed of three genetically well-defined clades, each most likely corresponding to a distinct species (A. Anker, in study). Thus, A. pacificus will need a careful taxonomic revision, with reappraisal of the status of A. gracilidigitus Miers, 1884, currently a junior synonym. For the time being, all Indo-Pacific material has to be identified as A. pacificus sensu lato. The Singaporean material of A. pacificus was collected in the intertidal areas of Siglap and East Coast in the early 2000s. The species has not been collected during the more recent intertidal surveys (CMBS 2012–2014), although one ovigerous female with regenerated chelipeds was seen (but not collected) at Labrador Beach in March 2014 (A. Anker, pers. obs.). It seems that A. pacificus is becoming rare in Singapore due to its preference for well-washed and clean sand-rock bottoms, which are now increasingly being replaced by silt and fine sand.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.042
Threshold uncertainty score0.100

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.004
Science and technology studies0.0020.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0300.016

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.231
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2016
Admission routes1
Has abstractyes

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