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Record W7161950203 · doi:10.82308/26217

Manipulating the innate and adaptive immune responses to develop novel therapies for «Aspergillus fumigatus» pulmonary infections

2019· dissertation· en· W7161950203 on OpenAlexaboutno aff
Benjamin Ralph

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldMedicine
TopicAntifungal resistance and susceptibility
Canadian institutionsnot available
Fundersnot available
KeywordsAspergillus fumigatusImmune systemLungAspergillosisAcquired immune systemInnate immune systemAirway

Abstract

fetched live from OpenAlex

The ubiquitous mold Aspergillus fumigatus is the causative agent of a wide range of diseases consisting of invasive and non-invasive pulmonary infections that are associated with a high rate of mortality. Immunosuppressed patients are at high risk of developing invasive pulmonary aspergillosis, characterized by a progressive necrotizing pneumonitis which, if untreated, can disseminate to other organs. Patients with impaired lung function, such as those with cystic fibrosis, are at high risk of developing a chronic non-invasive infection of the airways that is associated with declining lung function, frequent hospitalizations and a high rate of mortality. Current therapeutics for both manifestations of pulmonary aspergillosis have been disappointing due to their inability to eradicate non-invasive airway infections and their poor response rate in patients with invasive infections. As immunocompetent individuals are protected against A. fumigatus disease, immunotherapies are promising solutions for the prevention or treatment of Aspergillus disease. The overarching goal of this thesis is to investigate the immune response to non-invasive and invasive A. fumigatus infection in order to develop new therapies for these conditions. Studies of the host response to non-invasive pulmonary infections have been limited by the lack of an animal model for non-invasive infection. The first specific aim of this thesis builds on the development of a model of non-invasive airway infection to investigate the role of IL-1 signaling during a non-invasive A. fumigatus infection. We demonstrate that the absence of IL-1 signaling results in increased susceptibility to A. fumigatus airway infection associated with reduced number of pulmonary neutrophils and lower levels of production of G-CSF in infected lungs. Neutrophils lacking IL-1 signaling were found to undergo accelerated apoptosis leading to reduced viability and antifungal activity. Supplementation with G-CSF suppressed these neutrophil defects in vitro and restored pulmonary neutrophil recruitment and the resistance of IL-1 receptor knockout mice to A. fumigatus to wild-type levels. These studies establish a novel role for IL-1-dependent G-CSF in maintaining neutrophil viability during pulmonary Aspergillus infection. The second specific aim of this thesis focuses on the role of adaptive immunity in protection against invasive aspergillosis through the study of a novel glycoconjugate vaccine against A. fumigatus. In collaboration with investigators at the University of Alberta, we developed a glycoconjugate vaccine that generates a specific immune response against the galactofuranose side chain of the fungal cell wall polysaccharide galactomannan (TT-Galf4). Immunization with TT-Galf4 improves survival of immunocompetent mice following systemic challenge and neutropenic mice following pulmonary challenge with A. fumigatus. Although TT-Galf4 immunization elicits high level antibody production, polyclonal and monoclonal antibody transfer studies as well as experiments in B-cell deficient mice revealed that TT-Galf4-mediated immunity is antibody independent. The studies in this thesis explore the mechanisms of host resistance to invasive and non-invasive A. fumigatus infections. The first project sheds light on mechanisms of innate immunity during A. fumigatus airway infection, while the second project lays the groundwork for the development of a novel glycoconjugate vaccine for invasive aspergillosis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.318
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2019
Admission routes1
Has abstractyes

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