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Record W7162110617 · doi:10.82308/7090

A validation study of the pre-recorded data-based herd status index for dairy herd welfare identification

2021· dissertation· en· W7162110617 on OpenAlexaboutno aff
Naziya Mauyenova

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldVeterinary
TopicAnimal Behavior and Welfare Studies
Canadian institutionsnot available
Fundersnot available
KeywordsHerdWelfareCluster (spacecraft)Index (typography)Animal welfare

Abstract

fetched live from OpenAlex

Groups of researchers have proposed pre-screening assessment tools using pre-recorded data with the objective of remote detection of herds with the highest welfare issues, and, therefore, reducing the number of farm visits to those herds in need of intervention. Nevertheless, applying a new assessment method requires the evaluation of its validity relative to an existing assessment method. Such an evaluation is needed to ensure that the proposed method is reliable and corresponds to its objective for which it was developed. Hence, this thesis aimed to determine the validity of the herd status index (HSI) to identify an overall state of dairy cattle welfare at the herd level by identifying its performance level and the correspondence of its indicators relative to the proAction® on-farm outcome welfare assessment method.Farm-level data for five outcome measures of welfare – lameness, body condition, hock, neck, and knee injuries scores, collected as a part of the proAction® Quality Assurance Program were integrated with pre-recorded test-day dairy herd improvement (DHI) data for the three years before the on-farm assessment, extracted from the Lactanet Inc. (Sainte-Anne-de-Bellevue, QC, Canada) database. Two-stage cluster analysis was performed to partition study herds into subgroups based on five-dimensions – outcome measures of welfare, which resulted in four distinct groups of herds classified as groups with the least (C1), the highest (C4), and average (C1, C3) welfare issues. The clusters significantly differed (P < 0.05) from each other regarding all five-dimensions, except for the prevalence of neck injuries of herds in C1 and C2. Followed by the cluster analysis, the HSI was calculated for each of the study herds based on the method developed by Warner et al. (2020). The findings showed that the HSI based on twelve pre-recorded DHI indicators could identify herds with the highest welfare issues relative to herds’ classification based on proAction® on-farm welfare assessment data.With regards to individual pre-recorded indicators of the HSI, five out of twelve indicators – involuntary replacement and mortality rates, herd management and transition cow indexes, and prevalence of cows with high SCC > 400,000 cells/ml in milk significantly differed between herds in C2 and C4, that was in complete correspondence with the classification of herds based on outcome measures of welfare. Thus, these five indicators’ contribution to the HSI’s overall performance level is substantial and corresponds to the objective, making the HSI a comparatively valid method to identify herds with the highest welfare issues. However, in terms of the remaining indicators of the HSI, this study revealed no significant results between study clusters; therefore, it may indicate that the contribution of these indicators into the overall performance level of the HSI is not essential and they should be reconsidered based on scientific evidence and can be replaced by those which were shown to hold high potential

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.032
metaresearch head score (Gemma)0.045
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.032
Threshold uncertainty score0.167

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0320.045
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.094
GPT teacher head0.398
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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