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Effects of unsaturated fatty acids (USFA) on human gut microbiome profile in a subset of canola oil multicenter intervention trial (COMIT)

2013· article· en· W801795283 on OpenAlexaff
Shuaihua Pu, H. Khazanehei, Denis O. Krause, Sheila G. West, Penny M. Kris‐Etherton, David J.A. Jenkins, Benoı̂t Lamarche, Peter J.H. Jones, Ehsan Khafipour

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldMedicine
TopicNutritional Studies and Diet
Canadian institutionsUniversité LavalUniversity of ManitobaUniversity of TorontoCargill (Canada)
Fundersnot available
KeywordsCanolaFood sciencePopulationBiologyBacteroidetesAnimal scienceMedicineBiochemistry16S ribosomal RNA

Abstract

fetched live from OpenAlex

The effects of USFA treatments on gut microbiome profile were studied in 25 subjects (13 obese, 9 overweight, 3 normal) in a double‐blinded randomized crossover study consisting of five 30 d periods. Treatments included 60 g of canola oil (63% MUFA, 20% LA, 10% ALA), high oleic canola oil (72% MUFA, 15% LA, 2% ALA), high oleic canola/DHA oil (64% MUFA, 13% LA, 6% DHA), corn/safflower oil (18% MUFA, 69% LA) and flax/safflower oil (18% MUFA, 38% LA, 32% ALA). Stool samples were collected at the end of each period. DNA was extracted and amplified for pyrosequencing. Sequences were edited and taxonomically classified using mothur software and Silva database. Categorical data were analyzed using GLIMMIX of SAS and PLS‐DA of SIMCA. A total of 17 phyla and 195 genera were identified. The USFA treatments did not affect microbiome at the phylum level. However, obese participants had a higher proportion of Firmicutes to Bacteroidetes than overweight or normal groups ( P <0.05). At the genus level, three MUFA diets increased Clostridiales, Parabacteroides , Prevotella , and Turicibacter's population. Anaerostipes , Coprobacillus, and Faecalibacterium population were greater in high oleic canola oil compared to that in high oleic canola/DHA oil. Data suggest that obesity was associated with the decline in Bacteroidetes while USFA consumption only affected the microbiome at the genus level. Grant Funding Source : ARDI

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Non-randomized trial · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.290
Teacher spread0.268 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNon-randomized trial
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2013
Admission routes1
Has abstractyes

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