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Record W810296939 · doi:10.1128/9781555817121.ch2

Strengths and Shortcomings of Advanced Detection Technologies

2014· book-chapter· en· W810296939 on OpenAlexaff
Lawrence Goodridge, Pina M. Fratamico, Laurids Siig Christensen, M. Griffith, Jeffrey Hoorfar, M. Carter, Arun K. Bhunia, Richard O’Kennedy

Bibliographic record

VenueASM Press eBooks · 2014
Typebook-chapter
Languageen
FieldEngineering
TopicBiosensors and Analytical Detection
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsIsolation (microbiology)Biochemical engineeringIdentification (biology)BiologyBiotechnologyComputational biologyMicrobiologyEngineeringEcology

Abstract

fetched live from OpenAlex

To overcome the sensitivity and specificity issues, current confirmatory foodborne pathogen detection methods generally require an initial, time-consuming growth step in culture media, followed by isolation on solid media, biochemical identification, and molecular or serological conformation. Rapid-detection-based technologies can reduce the time and labor involved in screening food products for the presence of pathogens. Many of the rapid tests can be completed within 24 h, with high throughput, thereby reducing the labor involved in the testing process. These assays can be broadly grouped into three categories including immunologically based methods, nucleic acid-based assays, and biosensors. This review focuses on methods to isolate and detect pathogens in food samples. The presence of pathogens in air and the transmission of infections in air is an intriguing phenomenon, which, although subject to a never-ending debate, incidentally plays prominent epidemiological roles in husbandry and transmission of zoonotic microorganisms from the primary sources of infection, i.e., animals. The detection of microorganisms in air traditionally has been accomplished by sampling of airborne particles with subsequent analysis of the samples by a vast variety of detection methods. Principles of air sampling include solid and liquid impaction, filter-based samplers, and electrostatic absorption.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.008
metaresearch head score (Gemma)0.007
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.010
Threshold uncertainty score0.041

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0080.007
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0040.003
Science and technology studies0.0010.002
Scholarly communication0.0070.008
Open science0.0050.003
Research integrity0.0050.006
Insufficient payload (model declined to judge)0.0100.013

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.198
Teacher spread0.191 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2014
Admission routes1
Has abstractyes

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