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Record W840639497

Bacteriophages of Erwinia amylovora and their potential use in biological control

2000· dissertation· en· W840639497 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueBrock University Digital Repository (Brock University) · 2000
Typedissertation
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogenic Bacteria Studies
Canadian institutionsnot available
Fundersnot available
KeywordsErwiniaBiologyMicrobiologyBacteriophageFire blightBacteriaGeneticsEscherichia coli
DOInot available

Abstract

fetched live from OpenAlex

Forty-four bacteriophage isolates of Erwinia amy/ovora, the causal agent of fire
\nblight, were collected from sites in and around the Niagara Region of Southern Ontario
\nin the summer of 1998. Phages were isolated only from sites where fire blight was
\npresent. Thirty-seven of these phages were isolated from the soil surrounding infected
\ntrees, with the remainder isolated from aerial plant tissue samples. A mixture of six E.
\namy/ovora bacterial host strains was used to enrich field samples in order to avoid the
\nselection bias of a single-host system. Molecular characterization of the phages with a
\ncombination of peR and restriction endonuclease digestions showed that six distinct
\nphage types were isolated. Ten phage isolates related to the previously characterized
\nE. amy/ovora phage PEa1 were isolated, with some divergence of molecular markers
\nbetween phages isolated from different sites. The host ranges of the phages revealed
\nthat certain types were unable to efficiently lyse some E. amy/ovora strains, and that
\nsome types were able to lyse the epiphytic bacterium Pantoea agg/omerans. Biological
\ncontrol of E. amy/ovora by the bacteriophages was assessed in a bioassay using discs
\nof immature pear fruit. Twenty-three phage isolates were able to significantly suppress
\nthe incidence of bacterial exudate on the pear disc surface. Quantification of the
\nbacterial population remaining on the disc surface indicated that population reductions
\nof up to 97% were obtainable by phage treatment, but that elimination of bacteria from
\nthe surface was not possible with this model system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.942
Threshold uncertainty score0.981

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.159
Teacher spread0.149 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it