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Record W840639497

Bacteriophages of Erwinia amylovora and their potential use in biological control

2000· dissertation· en· W840639497 on OpenAlexaboutno aff
Jason J. Gill

Bibliographic record

VenueBrock University Digital Repository (Brock University) · 2000
Typedissertation
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogenic Bacteria Studies
Canadian institutionsnot available
Fundersnot available
KeywordsErwiniaBiologyMicrobiologyBacteriophageFire blightBacteriaGeneticsEscherichia coli
DOInot available

Abstract

fetched live from OpenAlex

Forty-four bacteriophage isolates of Erwinia amy/ovora, the causal agent of fire \nblight, were collected from sites in and around the Niagara Region of Southern Ontario \nin the summer of 1998. Phages were isolated only from sites where fire blight was \npresent. Thirty-seven of these phages were isolated from the soil surrounding infected \ntrees, with the remainder isolated from aerial plant tissue samples. A mixture of six E. \namy/ovora bacterial host strains was used to enrich field samples in order to avoid the \nselection bias of a single-host system. Molecular characterization of the phages with a \ncombination of peR and restriction endonuclease digestions showed that six distinct \nphage types were isolated. Ten phage isolates related to the previously characterized \nE. amy/ovora phage PEa1 were isolated, with some divergence of molecular markers \nbetween phages isolated from different sites. The host ranges of the phages revealed \nthat certain types were unable to efficiently lyse some E. amy/ovora strains, and that \nsome types were able to lyse the epiphytic bacterium Pantoea agg/omerans. Biological \ncontrol of E. amy/ovora by the bacteriophages was assessed in a bioassay using discs \nof immature pear fruit. Twenty-three phage isolates were able to significantly suppress \nthe incidence of bacterial exudate on the pear disc surface. Quantification of the \nbacterial population remaining on the disc surface indicated that population reductions \nof up to 97% were obtainable by phage treatment, but that elimination of bacteria from \nthe surface was not possible with this model system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.159
Teacher spread0.149 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2000
Admission routes1
Has abstractyes

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