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Record W90245675 · doi:10.1096/fasebj.20.5.lb47-b

The Anaphase Promoting Complex is Vital for Histone Metabolism in S. cerevisiae

2006· article· en· W90245675 on OpenAlexafffund
Emma L. Turner, Marnie G. Pisclevich, Megan D. Dash, Barry Hon Cheung Wong, Louise Jones, Troy A. A. Harkness

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Chromatin Dynamics
Canadian institutionsUniversity of Saskatchewan
FundersCanadian Institutes of Health Research
KeywordsChromatinCell biologyHistoneChromatin remodelingBiologyMitosisUbiquitin ligaseHistone H4Histone codeNucleosomeUbiquitinGeneticsDNAGene

Abstract

fetched live from OpenAlex

Proper chromosome segregation during mitosis is essential for genomic stability. The precursor required for chromosome packaging is chromatin, a repeating unit of 147bp DNA wrapped around the nucleosome core particle, which is a complex of eight histones, two each of H2A, H2B, H3 and H4. Chromatin assembly, the placement of histones onto naked DNA, depends upon the recruitment of acetylated histones to newly synthesized or damaged DNA. Research suggests a ubiquitin‐protein ligase, the Anaphase Promoting Complex (APC), is involved with both recruitment and acetylation of histones. The APC is an essential evolutionarily conserved factor required for mitotic passage. A multisubunit E3 ubiquitin ligase, the APC plays a major role in regulating the cell cycle by targeting proteins that block mitosis for proteasomal degradation. Newly acetylated histones are deposited onto DNA by the chromatin assembly factor CAF‐I. Recent studies in our lab indicate that the APC and CAF‐I cooperate for efficient mitotic chromatin assembly. The APC may also play a role in recruiting histone acetyltransferases (HATs) to the core histones. Preliminary experiments indicate that various HAT single mutant phenotypes are exacerbated by the temperature sensitive apc5 CA mutant. Furthermore we show that histone acetylation decreases in APC mutants, as does APC substrate degradation. We propose that cell proliferation is promoted by HAT activity in an APC‐dependent manner. As unregulated chromatin formation has been linked to a variety of diseases, including cancer, understanding these mechanisms are key to understanding disease onset and progression. This work is funded by the CIHR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.255
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes2
Has abstractyes

Explore more

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