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Special Challenges: Genetic Polymorphisms and Therapy

2010· book-chapter· en· W92815571 on OpenAlexaff
Maja Krajinović

Bibliographic record

VenueHumana Press eBooks · 2010
Typebook-chapter
Languageen
FieldMedicine
TopicFolate and B Vitamins Research
Canadian institutionsCentre Hospitalier Universitaire Sainte-JustineUniversité de Montréal
Fundersnot available
KeywordsGeneticsBiologyComputational biologyMedicineEvolutionary biology

Abstract

fetched live from OpenAlex

Pharmacogenetics postulates that interindividual variations in drug response are due to subtle genetic differences with little or no obvious phenotypes except in response to relevant drugs. Variations in treatment responses, manifested as drug resistance or adverse drug effects, could be due to polymorphisms in genes controlling drug transport, metabolism, disposition, targets, cell signaling, or cellular response pathways. Research carried out in recent years has allowed greater insight into the polymorphic content of genes and potential mechanisms by which inherited genetic variations affect function. These developments have accelerated studies assessing the association between relevant gene polymorphisms and variability in treatment responses. The identification of polymorphisms that contribute to this variability may lead to different treatment schedules, allowing for a reduction in drug side effects, while improving or maintaining the efficacy of treatment. This chapter will summarize the polymorphisms in genes that control pharmacokinetic and pharmacodynamic determinants of the response to treatment in acute lymphocytic leukemia (ALL). The majority of these studies have been performed in the pediatric population. Wherever available, the data on adult patients is described as well. These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.007
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.020
Threshold uncertainty score0.065

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.007
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.003
Scholarly communication0.0030.005
Open science0.0020.002
Research integrity0.0060.011
Insufficient payload (model declined to judge)0.0200.009

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.128
GPT teacher head0.303
Teacher spread0.175 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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