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Common rs3808607 Polymorphism in the Cholesterol 7α‐Hydroxylase ( <i>CYP7A1</i> ) Gene Determines the Degree of Responsiveness of Circulating Cholesterol Concentrations to Dairy Consumption

2015· article· en· W960850576 on OpenAlexaff
Mohammad M. H. Abdullah, Peter Eck, Patrick Couture, Benoı̂t Lamarche, Peter J.H. Jones

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldMedicine
TopicCholesterol and Lipid Metabolism
Canadian institutionsUniversité LavalNanoQuébec (Canada)University of Manitoba
Fundersnot available
KeywordsCholesterolSingle-nucleotide polymorphismGenotypeCholesterol 7 alpha-hydroxylaseAllelePolymorphism (computer science)ChemistryInternal medicineEndocrinologyBiologyFood scienceAnimal scienceBiochemistryMedicineGene

Abstract

fetched live from OpenAlex

We have previously demonstrated associations between the presence of the single nucleotide polymorphism (SNP) rs3808607 (-204 T>G) G allele of the CYP7A1 gene, which encodes the bile acid rate-limiting enzyme cholesterol 7α-hydroxylase, and significant reductions in total and LDL-cholesterol (TC and LDL-C) concentrations in response to plant sterol and barley β-glucan consumptions, separately. Our objective was to validate this genotype x nutrient interaction via a higher cholesterol and saturated fat dairy diet consumption. In a multicentre randomized crossover study, 99 normocholesterolemic adults consumed either 3 servings/day of DAIRY products (1% M.F. milk, 1.5% M.F. yogurt, and 34% M.F. cheese) or dairy-free CONTROL products for 28 days as part of a prudent diet. SNPs were assessed by TaqMan genotyping assay. Serum TC and LDL-C concentrations after DAIRY vs. CONTROL were higher (P<0.05) among carriers of the CYP7A1 rs3808607-G allele (GT: +0.20 and GG: +0.28 mmol/L for TC; GT: +0.19 and GG: +0.12 mmol/L for LDL-C) while no effect of DAIRY was seen among the TT homozygotes (-0.11 and -0.03 mmol/L for TC and LDL-C, respectively). These observations complement our findings from previous studies where carriers of the rs3808607-G allele showed higher sensitivity in responses of classic biomarkers of cardiovascular health to other dietary manipulations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.098
GPT teacher head0.313
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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