Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
2019· letter· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
afffundno abstract
24,006
citations
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CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
2015· article· en· Genome Research· Biochemistry, Genetics and Molecular Biology
fundno aff
12,819
citations
Structure, function and diversity of the healthy human microbiome
2012· article· en· Nature· Biochemistry, Genetics and Molecular Biology
afffund
11,935
citations
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
2013· article· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
afffundno abstract
9,357
citations
Diversity of the Human Intestinal Microbial Flora
2005· article· en· Science· Biochemistry, Genetics and Molecular Biology
aff
7,825
citations
PICRUSt2 for prediction of metagenome functions
2020· letter· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
affno abstract
6,537
citations
Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics
2017· review· en· Nature Reviews Gastroenterology & Hepatology· Biochemistry, Genetics and Molecular Biology
aff
5,334
citations
Gut Microbiota in Health and Disease
2010· article· en· Physiological Reviews· Biochemistry, Genetics and Molecular Biology
afffund
4,135
citations
Interaction between microbiota and immunity in health and disease
2020· review· en· Cell Research· Biochemistry, Genetics and Molecular Biology
fundno aff
3,867
citations
Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve
2011· article· en· Proceedings of the National Academy of Sciences· Biochemistry, Genetics and Molecular Biology
afffund
3,777
citations
Environment dominates over host genetics in shaping human gut microbiota
2018· article· en· Nature· Biochemistry, Genetics and Molecular Biology
fundno affno abstract
2,975
citations
A framework for human microbiome research
2012· article· en· Nature· Biochemistry, Genetics and Molecular Biology
afffund
2,749
citations
Gut–brain axis: how the microbiome influences anxiety and depression
2013· review· en· Trends in Neurosciences· Biochemistry, Genetics and Molecular Biology
affno abstract
2,485
citations
The Impact of Dietary Fiber on Gut Microbiota in Host Health and Disease
2018· review· en· Cell Host & Microbe· Biochemistry, Genetics and Molecular Biology
afffundno abstract
2,411
citations
The human tumor microbiome is composed of tumor type–specific intracellular bacteria
2020· article· en· Science· Biochemistry, Genetics and Molecular Biology
aff
2,390
citations
Role of the gut microbiota in nutrition and health
2018· review· en· BMJ· Biochemistry, Genetics and Molecular Biology
afffund
2,338
citations
Intestinal Inflammation Targets Cancer-Inducing Activity of the Microbiota
2012· article· en· Science· Biochemistry, Genetics and Molecular Biology
afffund
2,232
citations
Microbiome definition re-visited: old concepts and new challenges
2020· letter· en· Microbiome· Biochemistry, Genetics and Molecular Biology
aff
2,160
citations
The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of synbiotics
2020· review· en· Nature Reviews Gastroenterology & Hepatology· Biochemistry, Genetics and Molecular Biology
aff
2,058
citations
Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome
2015· article· en· Nature· Biochemistry, Genetics and Molecular Biology
affno abstractCorrection · OpenAlex missed it
1,986
citations
Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
2011· article· en· Genome Research· Biochemistry, Genetics and Molecular Biology
fundno aff
1,969
citations
MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data
2017· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
aff
1,965
citations
Probiotics and prebiotics in intestinal health and disease: from biology to the clinic
2019· review· en· Nature Reviews Gastroenterology & Hepatology· Biochemistry, Genetics and Molecular Biology
affno abstract
1,962
citations
Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity
2016· article· en· Science· Biochemistry, Genetics and Molecular Biology
aff
1,951
citations
Large-scale association analyses identify host factors influencing human gut microbiome composition
2021· article· en· Nature Genetics· Biochemistry, Genetics and Molecular Biology
affno abstract
1,832
citations