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4,299,418 works, Canadian by any of four routes.

Every filter state is a URL; the URL is the query; the query is citable via /q/⟨hash⟩. The page, the API and the export parse the same parameters.

The current cohort, streamed from the database: every work column, the machine labels, the provisional scores, and the per-row validation status. Exports are capped at 100,000 rows. Mints a permanent /q/ link for this exact query. The same filters always produce the same link, whoever asks.

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Nucleic Acids Research
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Direct Codex and Gemma labels are unvalidated and sparse. Distilled predictions cover the full frame and are also unvalidated. Choose the evidence source explicitly; absence of a direct label is never a negative label.

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The four routes compose: require the funder route and exclude affiliation to get the funder-only stratum no affiliation-based frame ever sees.

1,681 results · 1 filter active ·
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20002025
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Machine labels · sparse coverage
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An unlabeled work is unknown, not a negative. Label coverage is reported on every query.
1,681 works in the cohort · of 4,299,418page 2 of 34

Labels cover 2 of 1,681 works in this cohort. The rest are unlabeled, which is not a negative label: the label table is sparse today and grows as labeling rounds land.

Distilled predictions cover 1,681 of 1,681 works in this cohort. Predictions are machine_predicted_unvalidated. The Gemma side is a direct model label for every work (title-only); the Codex side is a distilled, calibrated classifier. Candidate is the union; consensus is the intersection.

afffundunlabeled
The Reactome Pathway Knowledgebase 2024
M Orlic-Milacic, Deidre Beavers, Patrick Conley, Chuqiao Gong, Marc Gillespie, Johannes Griss +18 more
2023· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
1,339
citations
affunlabeled
The IntAct molecular interaction database in 2012
Samuel Kerrien, Bruno Aranda, Lionel Breuza, Alan Bridge, F. Broackes-Carter, Carol Chen +16 more
2011· article· en· Nucleic Acids Research· Computer Science
machine prediction:candidate · scholarly_communicationconsensus · none
1,169
citations
affunlabeled
Pathway Commons, a web resource for biological pathway data
Ethan Cerami, Emek Demir, Igor Rodchenkov, Özgün Babur, Nadia Anwar, Nikolaus Schultz +2 more
2010· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
1,156
citations
affunlabeled
The Transporter Classification Database (TCDB): recent advances
Milton H. Saier, Vamsee Reddy, Brian V. Tsu, Muhammad Saad Ahmed, Chun Li, Gabriel Moreno‐Hagelsieb
2015· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
1,057
citations
afffundunlabeled
The BioGRID interaction database: 2013 update
Andrew Chatr‐aryamontri, Bobby‐Joe Breitkreutz, Sven Heinicke, Lorrie Boucher, Andrew Winter, Chris Stark +14 more
2012· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
1,031
citations
afffundunlabeled
The BioGRID interaction database: 2017 update
Andrew Chatr‐aryamontri, Rose Oughtred, Lorrie Boucher, Jennifer Rust, Christie Chang, Nadine K. Kolas +8 more
2016· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
1,022
citations
affunlabeled
The BioGRID interaction database: 2015 update
Andrew Chatr‐aryamontri, Bobby‐Joe Breitkreutz, Rose Oughtred, Lorrie Boucher, Sven Heinicke, Daici Chen +16 more
2014· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · scholarly_communicationconsensus · none
925
citations
affunlabeled
Reactome knowledgebase of human biological pathways and processes
Lisa Matthews, Gopal Gopinath, Marc Gillespie, Michael Caudy, David Croft, Bernard de Bono +14 more
2008· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
886
citations
afffundunlabeled
The BioGRID Interaction Database: 2011 update
C. Stark, Bobby‐Joe Breitkreutz, Andrew Chatr‐aryamontri, Lorrie Boucher, Rose Oughtred, Michael Livstone +9 more
2010· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
867
citations
affunlabeled
The Human Phenotype Ontology in 2017
Sebastian Köhler, Nicole Vasilevsky, Mark Engelstad, Erin D. Foster, Julie A. McMurry, Ségolène Aymé +53 more
2016· review· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
801
citations
fundno affunlabeled
D2P2: database of disordered protein predictions
Matt E. Oates, Pedro Romero, Takashi Ishida, Mohamed Ghalwash, Marcin J. Mizianty, Bin Xue +6 more
2012· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
730
citations
afffundunlabeled
RBPDB: a database of RNA-binding specificities
Kate B. Cook, Hilal Kazan, Khalid Zuberi, Quaid Morris, Timothy Hughes
2010· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
702
citations
afffundunlabeled
The BioGRID Interaction Database: 2008 update
Bobby‐Joe Breitkreutz, C. Stark, Teresa Reguly, Lorrie Boucher, Ashton Breitkreutz, Michael Livstone +6 more
2007· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
701
citations
afffundunlabeled
Up-to-date catalogues of yeast protein complexes
Shuye Pu, Jessica Wong, Brian Turner, Emerson Cho, Shoshana J. Wodak
2008· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
616
citations
fundno affunlabeled
eQuilibrator--the biochemical thermodynamics calculator
Avi I. Flamholz, Εlad Noor, Arren Bar‐Even, Ron Milo
2011· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
608
citations
affunlabeled
mirDIP 4.1—integrative database of human microRNA target predictions
Tomáš Tokár, Chiara Pastrello, Andrea E.M. Rossos, Mark Abovsky, Anne-Christin Hauschild, Mike J. Tsay +2 more
2017· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
590
citations
afffundunlabeled
PHASTEST: faster than PHASTER, better than PHAST
David S. Wishart, Scott Han, Sukanta Saha, Eponine Oler, Harrison Peters, Jason R. Grant +2 more
2023· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
589
citations
afffundunlabeled
SMPDB 2.0: Big Improvements to the Small Molecule Pathway Database
Timothy Jewison, Yilu Su, Fatemeh Miri Disfani, Yongjie Liang, Craig Knox, Adam Maciejewski +13 more
2013· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
492
citations
afffundunlabeled
Detection of G-quadruplex DNA in mammalian cells
Anthony R. Henderson, Yuliang Wu, Y. C. Huang, Elizabeth A. Chavez, Jeffrey L. Platt, F. Brad Johnson +3 more
2013· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
480
citations

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