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4,299,418 works, Canadian by any of four routes.

Every filter state is a URL; the URL is the query; the query is citable via /q/⟨hash⟩. The page, the API and the export parse the same parameters.

The current cohort, streamed from the database: every work column, the machine labels, the provisional scores, and the per-row validation status. Exports are capped at 100,000 rows. Mints a permanent /q/ link for this exact query. The same filters always produce the same link, whoever asks.

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Protein Structure and Dynamics
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Direct Codex and Gemma labels are unvalidated and sparse. Distilled predictions cover the full frame and are also unvalidated. Choose the evidence source explicitly; absence of a direct label is never a negative label.

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The four routes compose: require the funder route and exclude affiliation to get the funder-only stratum no affiliation-based frame ever sees.

2,009 results · 1 filter active ·
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20002025
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Machine labels · sparse coverage
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An unlabeled work is unknown, not a negative. Label coverage is reported on every query.
2,009 works in the cohort · of 4,299,418page 5 of 41

Labels cover 3 of 2,009 works in this cohort. The rest are unlabeled, which is not a negative label: the label table is sparse today and grows as labeling rounds land.

Distilled predictions cover 2,009 of 2,009 works in this cohort. Predictions are machine_predicted_unvalidated. The Gemma side is a direct model label for every work (title-only); the Codex side is a distilled, calibrated classifier. Candidate is the union; consensus is the intersection.

afffundno abstractunlabeled
Unveiling invisible protein states with NMR spectroscopy
T. Reid Alderson, Lewis E. Kay
2019· review· en· Current Opinion in Structural Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
115
citations
affunlabeled
CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed
Wonmuk Hwang, Steven L. Austin, Arnaud Blondel, Eric D. Boittier, Stefan Boresch, Matthias Buck +67 more
2024· review· en· The Journal of Physical Chemistry B· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
114
citations
affunlabeled
MFDp2
Marcin J. Mizianty, Zhenling Peng, Lukasz Kurgan
2013· article· en· Intrinsically Disordered Proteins· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · insufficient_payloadconsensus · none
114
citations
affunlabeled
Protein flexibility in the light of structural alphabets
Pierrick Craveur, Agnel Praveen Joseph, Jérémy Esque, Tarun Narwani, Floriane Noël, Nicolas K. Shinada +15 more
2015· review· en· Frontiers in Molecular Biosciences· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
114
citations
affunlabeled
Recent Developments in Amber Biomolecular Simulations
David A. Case, David S. Cerutti, Vinícius Wilian D. Cruzeiro, Thomas A. Darden, Robert E. Duke, Mahdieh Ghazimirsaeed +25 more
2025· article· en· Journal of Chemical Information and Modeling· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
114
citations
fundno affunlabeled
Macromolecular recognition in the Protein Data Bank
Joël Janin, Françis Rodier, Pinak Chakrabarti, Ranjit Prasad Bahadur
2006· article· en· Acta Crystallographica Section D Biological Crystallography· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
112
citations
fundno affunlabeled
Single-molecule theory of enzymatic inhibition
Tal Robin, Shlomi Reuveni, Michael Urbakh
2018· article· en· Nature Communications· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
100
citations
afffundunlabeled
Coarse-grained protein molecular dynamics simulations
Philippe Derreumaux, Normand Mousseau
2007· article· en· The Journal of Chemical Physics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
100
citations
afffundunlabeled
A mechanistic view of enzyme evolution
Gloria Yang, C.M. Miton, Nobuhiko Tokuriki
2020· review· en· Protein Science· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
100
citations
affunlabeled
PROSESS: a protein structure evaluation suite and server
Mark Berjanskii, Yu‐He Liang, Jianmin Zhou, Patrick Tang, Paul Stothard, You Zhou +5 more
2010· article· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
98
citations
afffundunlabeled
Simple sequences are rare in the Protein Data Bank
Melanie A. Huntley, G. Brian Golding
2002· article· en· Proteins Structure Function and Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
98
citations

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