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Enregistrement W1998250862 · doi:10.1074/jbc.m400791200

PimF, a Mannosyltransferase of Mycobacteria, Is Involved in the Biosynthesis of Phosphatidylinositol Mannosides and Lipoarabinomannan

2004· article· en· W1998250862 sur OpenAlexaff
David C. Alexander, Joses Jones, Tracy Tan, Jeffrey M. Chen, Jun Liu

Notice bibliographique

RevueJournal of Biological Chemistry · 2004
Typearticle
Langueen
DomaineMedicine
ThématiqueMycobacterium research and diagnosis
Établissements canadiensUniversity of Toronto
Organismes subventionnairesNational Institute of Allergy and Infectious Diseases
Mots-clésLipoarabinomannanPhosphatidylinositolBiosynthesisMicrobiologyChemistryMedicineBiologyBiochemistryTuberculosisMycobacterium tuberculosisSignal transductionEnzyme

Résumé

récupéré en direct d'OpenAlex

Phosphatidylinositol mannosides (PIMs) and their related molecules lipomannan (LM) and lipoarabinomannan (LAM) are important components of the mycobacterial cell wall. These molecules mediate host-pathogen interactions and exhibit immunomodulatory activities. The biosynthesis of these lipoglycans is not fully understood. In this study, we have identified a mycobacterial gene (Rv1500) that is involved in the synthesis of PIMs. We have named this gene pimF. Transposon mutagenesis of pimF of Mycobacterium marinum resulted in multiple phenotypes, including altered colony morphology, disappearance of tetracyl-PIM7, and accumulation of tetraacyl-PIM5. The syntheses of LAM and LM were also affected. In addition, the pimF mutant exhibited a defect during infection of cultured macrophage cells. Although the mutant and the cell of the marinum mutant the pimF of Mycobacterium of the These that is a that is involved in the of the of are the synthesis of LAM and this the of a involved in the of Phosphatidylinositol mannosides (PIMs) and their related molecules lipomannan (LM) and lipoarabinomannan (LAM) are important components of the mycobacterial cell wall. These molecules mediate host-pathogen interactions and exhibit immunomodulatory activities. The biosynthesis of these lipoglycans is not fully understood. In this study, we have identified a mycobacterial gene (Rv1500) that is involved in the synthesis of PIMs. We have named this gene pimF. Transposon mutagenesis of pimF of Mycobacterium marinum resulted in multiple phenotypes, including altered colony morphology, disappearance of tetracyl-PIM7, and accumulation of tetraacyl-PIM5. The syntheses of LAM and LM were also affected. In addition, the pimF mutant exhibited a defect during infection of cultured macrophage cells. Although the mutant and the cell of the marinum mutant the pimF of Mycobacterium of the These that is a that is involved in the of the of are the synthesis of LAM and this the of a involved in the of The mycobacterial cell interactions the and The cell of a the and a of that the and the cell mannosides (PIMs) of of and their lipomannan (LM) and lipoarabinomannan have in host-pathogen interactions and are the and of the the LAM in immunomodulatory including the of In addition, the LAM in the including Mycobacterium Mycobacterium Mycobacterium and Mycobacterium cell of and and of are mediate the of and have in the of the are lipoglycans of the is a the of and and the mycobacterial of have including LAM in in the Mycobacterium and Mycobacterium and in Mycobacterium their important is the biosynthesis of and that and LAM a that are related the of LM is a of and are and and The of is and the the of the of the of the of the is that is the of LM is LAM involved in these have not and of this and LM are a The and are the the of a is not in LM and LAM this study, we have identified a that the synthesis of and is involved in the biosynthesis of LAM and We have the that of LAM and LM the of and In the that in the we have this and marinum of mutagenesis of marinum were in and and and of of were and and and of marinum of the and of have marinum were and in were a of infection of and infection were and marinum were a of were identified of the marinum a that not the a the and of the of this a that in the and and were the of the These were the of marinum and the and were the the a and and of of and were marinum the These were were in the and in the were in the and in the were of were a of that were the of The were the in and the of were in a a and were The the of the The in and the of LAM and of LAM and the the of and were The were and in and were of LAM and were the also the is in mycobacterial LAM not LM of infection a The cell in in were a of in of and in the were of and a of infection of The infection in were the were in in of The these were and the macrophage were and of the a of The of and were were of marinum of is the biosynthesis of the mycobacterial cell wall. we have a the that in cell components the of the cell and this a of marinum and altered colony have and we have that exhibit altered and in and and We that colony is a and is fully the and the in this that this is the of cell mutant a a the colony exhibited and not The of the mutant including and the that of the cell not of the the mutant and the mutant are of the and the mutant are exhibit a the is cells. of the colony of pimF the gene that the in we of the mutant and of the marinum that the the of a we pimF that the is in the of that the pimF of marinum the of the In and are In and the marinum is the of the and not in and including and and a pimF that is a pimF not in the of of the that a of in the and in the These including a of including and We that involved in the biosynthesis of a cell the of pimF colony The cell of marinum that including and the synthesis of these in the we these In the were in of including and not the mutant and the not a of the mutant The mutant of and and and a these of of and and that these that in the of and these and were and the of of a of that in of the of that these a in the The and the are these we that and and The that the of is of and that the of is that of and that the marinum the mutant marinum and mutant and were in the and in the were of are and of of the of of the of PIMs. are the of and in and are the We that the were not in the were also not and identified and are of the that of pimF the altered and colony of the mutant the and and the colony These also the of the mutant the in the mutant In is not this is in in these mutant the the the these that is a that the biosynthesis of the synthesis of of LAM and LM are of LM and LAM the of the of these molecules this of involved in the of synthesis the synthesis of LAM and LM and have not are the the of these lipoglycans in and of is the identified in the of synthesis the synthesis of these are of LAM and is that of pimF the synthesis of LAM and we the of LAM and LM in the mutant and that of the in LAM and LM and the is in In the mutant LAM and LM were in the LAM and LM that LAM also that the of LAM in the mutant of LAM and LM were in the pimF of and These that is involved in the synthesis of LAM and of LAM and LM of LAM and LM were of and of were and mutant mutant mutant mutant and were in and The of LAM and LM are of the pimF including the of the the their of the are of the in their and the mycobacterial is of and that the LAM of a of and and that LAM a that the and of the in the of the pimF is the of the mutant is affected. were the the and the mutant of macrophage the were a were in and the is in that exhibited of in during the of infection of were the of pimF macrophage of that of the mutant the the infection of a and the the mutant and the the mutant also These that the pimF mutant is in the of LAM and LM in the in a The of the mutant and of not of the and the mutant of the the mutant and mutant infection of of infection of of this study, we have identified a mycobacterial a involved in the synthesis of PIMs. is the involved in a of synthesis that the of the of of this of pimF mutagenesis the synthesis of and resulted in the accumulation of of the mutant pimF the of that is the involved in synthesis that have identified and These of the of and of the the that is in a of including that the is involved in that and the and mediate the of synthesis In not the and a of that a the of The not is that a that is the synthesis of and LAM Although the of the is is that mediate the of is a this also that is involved in the biosynthesis of LM and The of in the pimF mutant is the of in the the and that is not a in the of LAM and the of LAM and LM in the mutant were and in the mutant pimF gene these that is a involved in the biosynthesis of LM and a of the biosynthesis of and the that The that of pimF not the synthesis of also this is of the in is a and not a the synthesis of LM and is not in LM LAM We of in and and the of pimF in that in a that the In a also a the of and synthesis we not the of in is that LAM and the biosynthesis of the and the of synthesis are and the of synthesis is the involved in a of synthesis identified The of is mediate the of the in of of and a of of pimF not the synthesis of LAM and is not that is a in the in the of Although is and are of not cell the synthesis of LM and LAM are a of in the including the and that the of In addition, and LAM are in the of and The molecules also mycobacterial The of and molecules were the of molecules in and that the of and identified We also of in and that LAM and LM of is that is involved in the synthesis of a of LM and LAM that their of the of a that are The that a is in and that these have and LAM that in the of and that the of the pimF mutant is the is in the of LAM and LM in the LAM is and of the The of the mutant not is not multiple In the these in the of the and are also mycobacterial interactions their in mycobacterial of the and of the pimF mutant the of this is not the that LAM not the of the Although LAM the of macrophage these were and LAM the are LAM and the LAM the of cell the the mutant not exhibit in the of of in cell we the of LAM mycobacterial in LAM of is a In in LAM is the of the and the of the In addition, LAM of is in of cell and infection These the of in in not have in the pimF mutant in the of LAM in the that the mycobacterial cell is important the of the that exhibited the pimF not colony also of the infection of of cell biosynthesis and the of cell components in mycobacterial The mycobacterial cell interactions the and The cell of a the and a of that the and the cell mannosides (PIMs) of of and their lipomannan (LM) and lipoarabinomannan have in host-pathogen interactions and are the and of the the LAM in immunomodulatory including the of In addition, the LAM in the including Mycobacterium Mycobacterium Mycobacterium and Mycobacterium cell of and and of are mediate the of and have in the of the are lipoglycans of the is a the of and and the mycobacterial of have including LAM in in the Mycobacterium and Mycobacterium and in Mycobacterium their important is the biosynthesis of and that and LAM a that are related the of LM is a of and are and and The of is and the the of the of the of the of the is that is the of LM is LAM involved in these have not and of this LAM and LM are a The and are the the of a is not in LM and LAM In this study, we have identified a that the synthesis of and is involved in the biosynthesis of LAM and We have the that of LAM and LM the of and In the that in the we have this and marinum of mutagenesis of marinum were in and and and of of were and and and of marinum of the and of have marinum were and in were a of infection of and infection were and marinum were a of were identified of the marinum a that not the a the and of the of this a that in the and and were the of the These were the of marinum and the and were the the a and and of of and were marinum the These were were in the and in the were in the and in the were of were a of that were the of The were the in and the of were in a a and were The the of the The in and the of LAM and of LAM and the the of and were The were and in and were of LAM and were the also the is in mycobacterial LAM not LM of infection a The cell in in were a of in of and in the were of and a of infection of The infection in were the were in in of The these were and the macrophage were and of the a of The of and were were and marinum of mutagenesis of marinum were in and and and of of were and and and of marinum of the and of have marinum were and in were a of infection of and infection were and marinum were a of were identified of the marinum a that not the a the and of the of this a that in the and and were the of the These were the of marinum and the and were the the a and and of of and were marinum the These were were in the and in the were in the and in the were of were a of that were the of The were the in and the of were in a a and were The the of the The in and the of LAM and of LAM and the the of and were The were and in and were of LAM and were the also the is in mycobacterial LAM not LM of infection a The cell in in were a of in of and in the were of and a of infection of The infection in were the were in in of The these were and the macrophage were and of the a of The of and were were of marinum of is the biosynthesis of the mycobacterial cell wall. we have a the that in cell components the of the cell and this a of marinum and altered colony have and we have that exhibit altered and in and and We that colony is a and is fully the and the in this that this is the of cell mutant a a the colony exhibited and not The of the mutant including and the that of the cell not of pimF the gene that the in we of the mutant and of the marinum that the the of a we pimF that the is in the of that the pimF of marinum the of the In and are In and the marinum is the of the and not in and including and and a pimF that is a pimF not in the of of the that a of in the and in the These including a of including and We that involved in the biosynthesis of a cell the of pimF colony The cell of marinum that including and the synthesis of these in the we these In the were in of including and not the mutant and the not a of the mutant The mutant of and and and a these of of and and that these that in the of and these and were and the of of a of that in of the of that these a in the The and the are these we that and and The that the of is of and that the of is that of and that the marinum the mutant marinum and mutant and were in the and in the were of are and of of the of of the of PIMs. are the of and in and are the We that the were not in the were also not and identified and are of the that of pimF the altered and colony of the mutant the and and the colony These also the of the mutant the in the mutant In is not this is in in these mutant the the the these that is a that the biosynthesis of the synthesis of of LAM and LM are of LM and LAM the of the of these molecules this of involved in the of synthesis the synthesis of LAM and LM and have not are the the of these lipoglycans in and of is the identified in the of synthesis the synthesis of these are of LAM and is that of pimF the synthesis of LAM and we the of LAM and LM in the mutant and that of the in LAM and LM and the is in In the mutant LAM and LM were in the LAM and LM that LAM also that the of LAM in the mutant of LAM and LM were in the pimF of and These that is involved in the synthesis of LAM and of LAM and LM of LAM and LM were of and of were and mutant mutant mutant mutant and were in and The of LAM and LM are of the pimF including the of the the their of the are of the in their and the mycobacterial is of and that the LAM of a of and and that LAM a that the and of the in the of the pimF is the of the mutant is affected. were the the and the mutant of macrophage the were a were in and the is in that exhibited of in during the of infection of were the of pimF macrophage of that of the mutant the the infection of a and the the mutant and the the mutant also These that the pimF mutant is in the of LAM and LM in the in a The of the mutant and of not of the and the mutant of the the mutant and mutant infection of of infection of of of marinum of is the biosynthesis of the mycobacterial cell wall. we have a the that in cell components the of the cell and this a of marinum and altered colony have and we have that exhibit altered and in and and We that colony is a and is fully the and the in this that this is the of cell The mutant a a the colony exhibited and not The of the mutant including and the that of the cell not of pimF the gene that the in we of the mutant and of the marinum that the the of a we pimF that the is in the of that the pimF of marinum the of the In and are In and the marinum is the of the and not in and including and and a pimF that is a pimF not in the of of the that a of in the and in the These including a of including and We that involved in the biosynthesis of a cell the of pimF colony The cell of marinum that including and the synthesis of these in the we these In the were in of including and not the mutant and the not a of the mutant The mutant of and and and a these of of and and that these that in the of and these and were and the of of a of that in of the of that these a in the The and the are these we that and and The that the of is of and that the of is that of and that the were not in the were also not and identified and are of the that of pimF the altered and colony of the mutant the and and the colony These also the of the mutant the in the mutant In is not this is in in these mutant the the the these that is a that the biosynthesis of the synthesis of of LAM and LM are of LM and LAM the of the of these molecules this of involved in the of synthesis the synthesis of LAM and LM and have not are the the of these lipoglycans in and of is the identified in the of synthesis the synthesis of these are of LAM and is that of pimF the synthesis of LAM and we the of LAM and LM in the mutant and that of the in LAM and LM and the is in In the mutant LAM and LM were in the LAM and LM that LAM also that the of LAM in the mutant of LAM and LM were in the pimF of and These that is involved in the synthesis of LAM and of the pimF including the of the the their of the are of the in their and the mycobacterial is of and that the LAM of a of and and that LAM a that the and of the in the of the pimF is the of the mutant is affected. were the the and the mutant of macrophage the were a were in and the is in that exhibited of in during the of infection of were the of pimF macrophage of that of the mutant the the infection of a and the the mutant and the the mutant also These that the pimF mutant is in the of LAM and LM in the in a The of the mutant and of not this study, we have identified a mycobacterial a involved in the synthesis of PIMs. is the involved in a of synthesis that the of the of of this of pimF mutagenesis the synthesis of and resulted in the accumulation of of the mutant pimF the of that is the involved in synthesis that have identified and These of the of and of the the that is in a of including that the is involved in that and the and mediate the of synthesis In not the and a of that a the of The not is that a that is the synthesis of and LAM Although the of the is is that mediate the of is a this also that is involved in the biosynthesis of LM and The of in the pimF mutant is the of in the the and that is not a in the of LAM and the of LAM and LM in the mutant were and in the mutant pimF gene these that is a involved in the biosynthesis of LM and a of the biosynthesis of and the that The that of pimF not the synthesis of also this is of the in is a and not a the synthesis of LM and is not in LM LAM We of in and and the of pimF in that in a that the In a also a the of and synthesis we not the of in is that LAM and of pimF not the synthesis of LAM and is not that is a in the in the of Although is and are of not cell the synthesis of LM and LAM are a of in the including the and that the of In addition, and LAM are in the of and The molecules also mycobacterial The of and molecules were the of molecules in and that the of and identified We also of in and that LAM and LM of is that is involved in the synthesis of a of LM and LAM that their of the of a that are The that a is in and that these have and LAM that in the of and that the of the pimF mutant is the is in the of LAM and LM in the LAM is and of the The of the mutant not is not multiple In the these in the of the and are also mycobacterial interactions their in mycobacterial of the and of the pimF mutant the of this is not the that LAM not the of the Although LAM the of macrophage these were and LAM the are LAM and the LAM the of cell the the mutant not exhibit in the of of in cell we the of LAM mycobacterial in LAM of is a In in LAM is the of the and the of the In addition, LAM of is in of cell and infection These the of in in not have in the pimF mutant in the of LAM in the that the mycobacterial cell is important the of the that exhibited the pimF not colony also of the infection of of cell biosynthesis and the of cell components in mycobacterial In this study, we have identified a mycobacterial a involved in the synthesis of PIMs. is the involved in a of synthesis that the of the of of this of pimF mutagenesis the synthesis of and resulted in the accumulation of of the mutant pimF the of that is the involved in synthesis that have identified and These of the of and of the the that is in a of including that the is involved in that and the and mediate the of synthesis In not the and a of that a the of The not is that a that is the synthesis of and LAM Although the of the is is that mediate the of is a this also that is involved in the biosynthesis of LM and The of in the pimF mutant is the of in the the and that is not a in the of LAM and the of LAM and LM in the mutant were and in the mutant pimF gene these that is a involved in the biosynthesis of LM and a of the biosynthesis of and the that The that of pimF not the synthesis of also this is of the in is a and not a the synthesis of LM and is not in LM LAM We of in and and the of pimF in that in a that the In a also a the of and synthesis we not the of in is that LAM and of pimF not the synthesis of LAM and is not that is a in the in the of Although is and are of not cell the synthesis of LM and LAM are a of in the including the and that the of In addition, and LAM are in the of and The molecules also mycobacterial The of and molecules were the of molecules in and that the of and identified We also of in and that LAM and LM of is that is involved in the synthesis of a of LM and LAM that their of the of a that are The that a is in and that these have and LAM that in the of and that the of the pimF mutant is the is in the of LAM and LM in the LAM is and of the The of the mutant not is not multiple In the these in the of the and are also mycobacterial interactions their in mycobacterial of the and of the pimF mutant the of this is not the that LAM not the of the Although LAM the of macrophage these were and LAM the are LAM and the LAM the of cell the the mutant not exhibit in the of of in cell we the of LAM mycobacterial in LAM of is a In in LAM is the of the and the of the In addition, LAM of is in of cell and infection These the of in in not have in the pimF mutant in the of LAM in the that the mycobacterial cell is important the of the that exhibited the pimF not colony also of the infection of of cell biosynthesis and the of cell components in mycobacterial We

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Expérimental (laboratoire) · Signal consensuel: Expérimental (laboratoire)
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,072
Score d'incertitude au seuil0,331

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0010,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,029
Tête enseignante GPT0,275
Écart entre enseignants0,246 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeExpérimental (laboratoire)
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations59
Publié2004
Routes d'admission1
Résumé présentoui

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