Association between the C3435T polymorphism of the MDR1 gene and Crohnʼs disease
Notice bibliographique
Résumé
To the Editor: We read with interest the recent case-case control study by Urcelay et al,1 in which they found an increased incidence of the C3435 allele and the homozygous CC genotype of the multidrug resistance gene (MDR)1 in Crohn's disease (CD). The MDR1 gene encodes P-glycoprotein 170, which acts as an intestinal epithelial efflux transporter pump and may play a role in protecting the epithelium against xenobiotics and bacterial products.2 The finding that MDR1 knockout mice develop colitis, which is reversed with antibiotics,3 provides support to the role of this gene in the pathogenesis of IBD through altered host-bacterial interplay. We recently genotyped the C3435T MDR1 polymorphism (rs 1045642) in 247 CD (43.7% female; 27.9% Jewish; 95.1% white) and 112 ulcerative colitis (UC; 54.5% female; 21.4% Jewish; 89.3% white) affected individuals and 512 unaffected family members (49.4% female; 22.5% Jewish; 93.9% white) from trio and tetrad families. Genotyping was performed using the Sequenom Mass Array 7K system (San Diego, CA) and matrix-assisted laser desorption-time of flight mass spectometry analysis. Phenotypic information was obtained from medical case notes for disease type, behavior, and location according to the Montreal classification.4 Associations with disease susceptibility and genotype-phenotype relationships were analyzed using the family-based association test. We found no association between the C3435T polymorphism and UC (z = 0.92; P = 0.36). However, over-transmission of the 3435T allele was significantly associated with CD (z = 2.26; P = 0.02), with the strongest association arising in Jewish patients (Z = 2.50; P = 0.01). Thus far, more studies have implicated MDR1 variation in UC rather than CD, leading to the suggestion that MDR1 may be a “UC-specific” gene.5 Our data and those of Urcelay and colleagues suggest that this is not the case. Indeed, although the mdr1 knockout mouse mentioned earlier displays a histologic picture similar to UC with superficial epithelial inflammation, it also displays some features consistent with CD, such as transmural B- and T-cell infiltrates.5 It is noteworthy, however, that our data suggest that over-transmission of the 3435T allele is associated with CD, whereas those of Urcelay and colleagues suggest that the same allele may in fact protect against the disease. Carriage of the TT genotype has been associated with reduced P-glycoprotein function in whites,6 but the mechanism by which this may confer susceptibility to, or protect against, CD remains unclear. As Ho et al5 pointed out in a recent review paper in this journal, the role that P-glycoprotein plays in the innate and adaptive immunity framework of the gastrointestinal tract remains a crucial area of future research. There has certainly been considerable heterogeneity in the reported associations between the MDR1 C3435T polymorphism and UC or CD; carriage of the 3435T allele, for example, was shown to confer susceptibility to UC but not CD in Scottish7 and German8 populations. Our data add to this heterogeneity and, as Urcelay and colleagues point out, these reported differences in MDR1 genotype associations are likely to be explained by ethnic diversity. The varied association of the MDR1 gene with IBD susceptibility certainly reinforces the importance of stratifying for differences in ethnic composition of study populations when carrying out such genetic association studies for potential disease susceptibility or protective genes.
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,001 | 0,006 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,000 |
| Méta-épidémiologie (sens large) | 0,001 | 0,000 |
| Bibliométrie | 0,000 | 0,000 |
| Études des sciences et des technologies | 0,001 | 0,001 |
| Communication savante | 0,001 | 0,001 |
| Science ouverte | 0,000 | 0,000 |
| Intégrité de la recherche | 0,007 | 0,004 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,004 | 0,001 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».