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Enregistrement W2019663496 · doi:10.1074/jbc.m109.090753

Transient and Big Are Key Features of an Invertebrate T-type Channel (LCa3) from the Central Nervous System of Lymnaea stagnalis

2010· article· en· W2019663496 sur OpenAlexafffund
Adriano Senatore, J. David Spafford

Notice bibliographique

RevueJournal of Biological Chemistry · 2010
Typearticle
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueIon channel regulation and function
Établissements canadiensUniversity of Waterloo
Organismes subventionnairesNatural Sciences and Engineering Research Council of Canada
Mots-clésLymnaea stagnalisBiologyLymnaeaIon channelSnailVoltage-dependent calcium channelCalcium channelChannel (broadcasting)Cell biologyBiophysicsNeuroscienceChemistryCalciumGeneticsEcologyReceptorComputer science

Résumé

récupéré en direct d'OpenAlex

Here we describe features of the first non-mammalian T-type calcium channel (LCav3) expressed in vitro. This molluscan channel possesses combined biophysical properties that are reminiscent of all mammalian T-type channels. It exhibits T-type features such as “transient” kinetics, but the “tiny” label, usually associated with Ba2+ conductance, is hard to reconcile with the “bigness” of this channel in many respects. LCav3 is 25% larger than any voltage-gated ion channel expressed to date. It codes for a massive, 322-kDa protein that conducts large macroscopic currents in vitro. LCav3 is also the most abundant Ca2+ channel transcript in the snail nervous system. A window current at typical resting potentials appears to be at least as large as that reported for mammalian channels. This distant gene provides a unique perspective to analyze the structural, functional, drug binding, and evolutionary aspects of T-type channels. Here we describe features of the first non-mammalian T-type calcium channel (LCav3) expressed in vitro. This molluscan channel possesses combined biophysical properties that are reminiscent of all mammalian T-type channels. It exhibits T-type features such as “transient” kinetics, but the “tiny” label, usually associated with Ba2+ conductance, is hard to reconcile with the “bigness” of this channel in many respects. LCav3 is 25% larger than any voltage-gated ion channel expressed to date. It codes for a massive, 322-kDa protein that conducts large macroscopic currents in vitro. LCav3 is also the most abundant Ca2+ channel transcript in the snail nervous system. A window current at typical resting potentials appears to be at least as large as that reported for mammalian channels. This distant gene provides a unique perspective to analyze the structural, functional, drug binding, and evolutionary aspects of T-type channels. IntroductionT-type calcium channels open in response to slight depolarizations in the low voltage range. Paradoxically, they are also recruited after membrane hyperpolarization as occurs during rebound burst firing (1.Kim D. Song I. Keum S. Lee T. Jeong M.J. Kim S.S. McEnery M.W. Shin H.S. Neuron. 2001; 31: 35-45Abstract Full Text Full Text PDF PubMed Scopus (422) Google Scholar). A window current of T-type channels is a feature that permits Ca2+ entry at rest (2.Chemin J. Monteil A. Briquaire C. Richard S. Perez-Reyes E. Nargeot J. Lory P. FEBS Lett. 2000; 478: 166-172Crossref PubMed Scopus (95) Google Scholar) and contributes to differentiation and growth promoting functions in both excitable and non-excitable cells (3.Lory P. Bidaud I. Chemin J. Cell Calcium. 2006; 40: 135-146Crossref PubMed Scopus (111) Google Scholar). T-type channels are also a leading pharmaceutical drug target and are implicated in a wide range of conditions such as epilepsy, pain, hypertension, cancer, and mental disorders (4.Shin H.S. Cheong E.J. Choi S. Lee J. Na H.S. Curr. Opin. Pharmacol. 2008; 8: 33-41Crossref PubMed Scopus (76) Google Scholar).T-type Ca2+ currents were first measured in starfish eggs using a two-electrode voltage clamp (5.Hagiwara S. Ozawa S. Sand O. J. Gen. Physiol. 1975; 65: 617-644Crossref PubMed Scopus (162) Google Scholar). Currents conducted by “Channel I” were evoked by small depolarizations (low voltage-activated), visible as a small hump in a current amplitude versus test potential plot, appearing inconsequential beside the Channel II currents elicited by larger depolarizations (high voltage-activated). Ca2+ channel types would be discriminated further by Tsien and co-workers (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar) on the basis of properties where Ba2+ is the charge carrier. High voltage-activated L-type channels have a large unitary Ba2+ conductance with long-lasting openings, N-type (or non-L-type) channels are typically associated with neurons of intermediate unitary conductance, and the low voltage-activated, T-type channels produce transient currents that are of tiny unitary conductance in Ba2+ and close slowly upon membrane repolarization, producing a slowly deactivating tail current (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar).T-type channels remain as the least understood among the Ca2+ channel families. Although most of the 10 mammalian Ca2+ channel genes were characterized in the late 1980s, an additional decade was required for a description of the three T-type genes, Cav3.1 (α1G), Cav3.2 (α1H), and Cav3.3 (α1I) (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar). Progress in understanding T-type channel functions continues to be hampered by the lack of highly selective blockers that discriminate between Cav3 channel types or separate Cav3 channels from related L-type (Cav1) and non-L-type (Cav2) Ca2+ channels, which usually produce more robust Ca2+ entry into the same cells (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar).Here we describe the in vitro expression characteristics of the first non-mammalian, T-type channel, LCav3, cloned from the pond snail, Lymnaea stagnalis. This structurally distant channel has quintessential features of T-types such as transient kinetics. LCav3 is big in many respects, such as its protein size; it expresses large macroscopic currents in human cells, it is the most abundant Ca2+ channel transcript in the snail nervous system, and it generates window currents that appear to be at least as large as those reported for mammalian channels. LCav3 provides a unique perspective to analyze the structure, function, and drug binding of T-type channels and serves as a useful surrogate in residue swapping experiments. Searches for the fundamental mechanisms that regulate this singleton invertebrate T-type channel will be facilitated by the simple molluscan preparation, where accessible and identified neurons underlying well described behaviors can be studied in isolated Lymnaea neurons, cultured synapses, or within intact, identified networks in situ. Also, LCav3 provides nourishment for evolutionary speculation. Although the first gastropods (500 million years ago) are likely quite distant from this ancestral branch point, the extant snail homolog, LCav3, is reminiscent of the gene that predates the speciation that led to the emergence of the three distinct, mammalian T-type channel genes. IntroductionT-type calcium channels open in response to slight depolarizations in the low voltage range. Paradoxically, they are also recruited after membrane hyperpolarization as occurs during rebound burst firing (1.Kim D. Song I. Keum S. Lee T. Jeong M.J. Kim S.S. McEnery M.W. Shin H.S. Neuron. 2001; 31: 35-45Abstract Full Text Full Text PDF PubMed Scopus (422) Google Scholar). A window current of T-type channels is a feature that permits Ca2+ entry at rest (2.Chemin J. Monteil A. Briquaire C. Richard S. Perez-Reyes E. Nargeot J. Lory P. FEBS Lett. 2000; 478: 166-172Crossref PubMed Scopus (95) Google Scholar) and contributes to differentiation and growth promoting functions in both excitable and non-excitable cells (3.Lory P. Bidaud I. Chemin J. Cell Calcium. 2006; 40: 135-146Crossref PubMed Scopus (111) Google Scholar). T-type channels are also a leading pharmaceutical drug target and are implicated in a wide range of conditions such as epilepsy, pain, hypertension, cancer, and mental disorders (4.Shin H.S. Cheong E.J. Choi S. Lee J. Na H.S. Curr. Opin. Pharmacol. 2008; 8: 33-41Crossref PubMed Scopus (76) Google Scholar).T-type Ca2+ currents were first measured in starfish eggs using a two-electrode voltage clamp (5.Hagiwara S. Ozawa S. Sand O. J. Gen. Physiol. 1975; 65: 617-644Crossref PubMed Scopus (162) Google Scholar). Currents conducted by “Channel I” were evoked by small depolarizations (low voltage-activated), visible as a small hump in a current amplitude versus test potential plot, appearing inconsequential beside the Channel II currents elicited by larger depolarizations (high voltage-activated). Ca2+ channel types would be discriminated further by Tsien and co-workers (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar) on the basis of properties where Ba2+ is the charge carrier. High voltage-activated L-type channels have a large unitary Ba2+ conductance with long-lasting openings, N-type (or non-L-type) channels are typically associated with neurons of intermediate unitary conductance, and the low voltage-activated, T-type channels produce transient currents that are of tiny unitary conductance in Ba2+ and close slowly upon membrane repolarization, producing a slowly deactivating tail current (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar).T-type channels remain as the least understood among the Ca2+ channel families. Although most of the 10 mammalian Ca2+ channel genes were characterized in the late 1980s, an additional decade was required for a description of the three T-type genes, Cav3.1 (α1G), Cav3.2 (α1H), and Cav3.3 (α1I) (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar). Progress in understanding T-type channel functions continues to be hampered by the lack of highly selective blockers that discriminate between Cav3 channel types or separate Cav3 channels from related L-type (Cav1) and non-L-type (Cav2) Ca2+ channels, which usually produce more robust Ca2+ entry into the same cells (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar).Here we describe the in vitro expression characteristics of the first non-mammalian, T-type channel, LCav3, cloned from the pond snail, Lymnaea stagnalis. This structurally distant channel has quintessential features of T-types such as transient kinetics. LCav3 is big in many respects, such as its protein size; it expresses large macroscopic currents in human cells, it is the most abundant Ca2+ channel transcript in the snail nervous system, and it generates window currents that appear to be at least as large as those reported for mammalian channels. LCav3 provides a unique perspective to analyze the structure, function, and drug binding of T-type channels and serves as a useful surrogate in residue swapping experiments. Searches for the fundamental mechanisms that regulate this singleton invertebrate T-type channel will be facilitated by the simple molluscan preparation, where accessible and identified neurons underlying well described behaviors can be studied in isolated Lymnaea neurons, cultured synapses, or within intact, identified networks in situ. Also, LCav3 provides nourishment for evolutionary speculation. Although the first gastropods (500 million years ago) are likely quite distant from this ancestral branch point, the extant snail homolog, LCav3, is reminiscent of the gene that predates the speciation that led to the emergence of the three distinct, mammalian T-type channel genes.

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Expérimental (laboratoire) · Signal consensuel: Expérimental (laboratoire)
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,064
Score d'incertitude au seuil0,265

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,016
Tête enseignante GPT0,219
Écart entre enseignants0,203 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeExpérimental (laboratoire)
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations44
Publié2010
Routes d'admission2
Résumé présentoui

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