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Record W2019663496 · doi:10.1074/jbc.m109.090753

Transient and Big Are Key Features of an Invertebrate T-type Channel (LCa3) from the Central Nervous System of Lymnaea stagnalis

2010· article· en· W2019663496 on OpenAlexafffund
Adriano Senatore, J. David Spafford

Bibliographic record

VenueJournal of Biological Chemistry · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon channel regulation and function
Canadian institutionsUniversity of Waterloo
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsLymnaea stagnalisBiologyLymnaeaIon channelSnailVoltage-dependent calcium channelCalcium channelChannel (broadcasting)Cell biologyBiophysicsNeuroscienceChemistryCalciumGeneticsEcologyReceptorComputer science

Abstract

fetched live from OpenAlex

Here we describe features of the first non-mammalian T-type calcium channel (LCav3) expressed in vitro. This molluscan channel possesses combined biophysical properties that are reminiscent of all mammalian T-type channels. It exhibits T-type features such as “transient” kinetics, but the “tiny” label, usually associated with Ba2+ conductance, is hard to reconcile with the “bigness” of this channel in many respects. LCav3 is 25% larger than any voltage-gated ion channel expressed to date. It codes for a massive, 322-kDa protein that conducts large macroscopic currents in vitro. LCav3 is also the most abundant Ca2+ channel transcript in the snail nervous system. A window current at typical resting potentials appears to be at least as large as that reported for mammalian channels. This distant gene provides a unique perspective to analyze the structural, functional, drug binding, and evolutionary aspects of T-type channels. Here we describe features of the first non-mammalian T-type calcium channel (LCav3) expressed in vitro. This molluscan channel possesses combined biophysical properties that are reminiscent of all mammalian T-type channels. It exhibits T-type features such as “transient” kinetics, but the “tiny” label, usually associated with Ba2+ conductance, is hard to reconcile with the “bigness” of this channel in many respects. LCav3 is 25% larger than any voltage-gated ion channel expressed to date. It codes for a massive, 322-kDa protein that conducts large macroscopic currents in vitro. LCav3 is also the most abundant Ca2+ channel transcript in the snail nervous system. A window current at typical resting potentials appears to be at least as large as that reported for mammalian channels. This distant gene provides a unique perspective to analyze the structural, functional, drug binding, and evolutionary aspects of T-type channels. IntroductionT-type calcium channels open in response to slight depolarizations in the low voltage range. Paradoxically, they are also recruited after membrane hyperpolarization as occurs during rebound burst firing (1.Kim D. Song I. Keum S. Lee T. Jeong M.J. Kim S.S. McEnery M.W. Shin H.S. Neuron. 2001; 31: 35-45Abstract Full Text Full Text PDF PubMed Scopus (422) Google Scholar). A window current of T-type channels is a feature that permits Ca2+ entry at rest (2.Chemin J. Monteil A. Briquaire C. Richard S. Perez-Reyes E. Nargeot J. Lory P. FEBS Lett. 2000; 478: 166-172Crossref PubMed Scopus (95) Google Scholar) and contributes to differentiation and growth promoting functions in both excitable and non-excitable cells (3.Lory P. Bidaud I. Chemin J. Cell Calcium. 2006; 40: 135-146Crossref PubMed Scopus (111) Google Scholar). T-type channels are also a leading pharmaceutical drug target and are implicated in a wide range of conditions such as epilepsy, pain, hypertension, cancer, and mental disorders (4.Shin H.S. Cheong E.J. Choi S. Lee J. Na H.S. Curr. Opin. Pharmacol. 2008; 8: 33-41Crossref PubMed Scopus (76) Google Scholar).T-type Ca2+ currents were first measured in starfish eggs using a two-electrode voltage clamp (5.Hagiwara S. Ozawa S. Sand O. J. Gen. Physiol. 1975; 65: 617-644Crossref PubMed Scopus (162) Google Scholar). Currents conducted by “Channel I” were evoked by small depolarizations (low voltage-activated), visible as a small hump in a current amplitude versus test potential plot, appearing inconsequential beside the Channel II currents elicited by larger depolarizations (high voltage-activated). Ca2+ channel types would be discriminated further by Tsien and co-workers (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar) on the basis of properties where Ba2+ is the charge carrier. High voltage-activated L-type channels have a large unitary Ba2+ conductance with long-lasting openings, N-type (or non-L-type) channels are typically associated with neurons of intermediate unitary conductance, and the low voltage-activated, T-type channels produce transient currents that are of tiny unitary conductance in Ba2+ and close slowly upon membrane repolarization, producing a slowly deactivating tail current (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar).T-type channels remain as the least understood among the Ca2+ channel families. Although most of the 10 mammalian Ca2+ channel genes were characterized in the late 1980s, an additional decade was required for a description of the three T-type genes, Cav3.1 (α1G), Cav3.2 (α1H), and Cav3.3 (α1I) (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar). Progress in understanding T-type channel functions continues to be hampered by the lack of highly selective blockers that discriminate between Cav3 channel types or separate Cav3 channels from related L-type (Cav1) and non-L-type (Cav2) Ca2+ channels, which usually produce more robust Ca2+ entry into the same cells (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar).Here we describe the in vitro expression characteristics of the first non-mammalian, T-type channel, LCav3, cloned from the pond snail, Lymnaea stagnalis. This structurally distant channel has quintessential features of T-types such as transient kinetics. LCav3 is big in many respects, such as its protein size; it expresses large macroscopic currents in human cells, it is the most abundant Ca2+ channel transcript in the snail nervous system, and it generates window currents that appear to be at least as large as those reported for mammalian channels. LCav3 provides a unique perspective to analyze the structure, function, and drug binding of T-type channels and serves as a useful surrogate in residue swapping experiments. Searches for the fundamental mechanisms that regulate this singleton invertebrate T-type channel will be facilitated by the simple molluscan preparation, where accessible and identified neurons underlying well described behaviors can be studied in isolated Lymnaea neurons, cultured synapses, or within intact, identified networks in situ. Also, LCav3 provides nourishment for evolutionary speculation. Although the first gastropods (500 million years ago) are likely quite distant from this ancestral branch point, the extant snail homolog, LCav3, is reminiscent of the gene that predates the speciation that led to the emergence of the three distinct, mammalian T-type channel genes. IntroductionT-type calcium channels open in response to slight depolarizations in the low voltage range. Paradoxically, they are also recruited after membrane hyperpolarization as occurs during rebound burst firing (1.Kim D. Song I. Keum S. Lee T. Jeong M.J. Kim S.S. McEnery M.W. Shin H.S. Neuron. 2001; 31: 35-45Abstract Full Text Full Text PDF PubMed Scopus (422) Google Scholar). A window current of T-type channels is a feature that permits Ca2+ entry at rest (2.Chemin J. Monteil A. Briquaire C. Richard S. Perez-Reyes E. Nargeot J. Lory P. FEBS Lett. 2000; 478: 166-172Crossref PubMed Scopus (95) Google Scholar) and contributes to differentiation and growth promoting functions in both excitable and non-excitable cells (3.Lory P. Bidaud I. Chemin J. Cell Calcium. 2006; 40: 135-146Crossref PubMed Scopus (111) Google Scholar). T-type channels are also a leading pharmaceutical drug target and are implicated in a wide range of conditions such as epilepsy, pain, hypertension, cancer, and mental disorders (4.Shin H.S. Cheong E.J. Choi S. Lee J. Na H.S. Curr. Opin. Pharmacol. 2008; 8: 33-41Crossref PubMed Scopus (76) Google Scholar).T-type Ca2+ currents were first measured in starfish eggs using a two-electrode voltage clamp (5.Hagiwara S. Ozawa S. Sand O. J. Gen. Physiol. 1975; 65: 617-644Crossref PubMed Scopus (162) Google Scholar). Currents conducted by “Channel I” were evoked by small depolarizations (low voltage-activated), visible as a small hump in a current amplitude versus test potential plot, appearing inconsequential beside the Channel II currents elicited by larger depolarizations (high voltage-activated). Ca2+ channel types would be discriminated further by Tsien and co-workers (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar) on the basis of properties where Ba2+ is the charge carrier. High voltage-activated L-type channels have a large unitary Ba2+ conductance with long-lasting openings, N-type (or non-L-type) channels are typically associated with neurons of intermediate unitary conductance, and the low voltage-activated, T-type channels produce transient currents that are of tiny unitary conductance in Ba2+ and close slowly upon membrane repolarization, producing a slowly deactivating tail current (6.Nowycky M.C. Fox A.P. Tsien R.W. Nature. 1985; 316: 440-443Crossref PubMed Scopus (1600) Google Scholar).T-type channels remain as the least understood among the Ca2+ channel families. Although most of the 10 mammalian Ca2+ channel genes were characterized in the late 1980s, an additional decade was required for a description of the three T-type genes, Cav3.1 (α1G), Cav3.2 (α1H), and Cav3.3 (α1I) (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar). Progress in understanding T-type channel functions continues to be hampered by the lack of highly selective blockers that discriminate between Cav3 channel types or separate Cav3 channels from related L-type (Cav1) and non-L-type (Cav2) Ca2+ channels, which usually produce more robust Ca2+ entry into the same cells (7.Perez-Reyes E. Physiol. Rev. 2003; 83: 117-161Crossref PubMed Scopus (1320) Google Scholar).Here we describe the in vitro expression characteristics of the first non-mammalian, T-type channel, LCav3, cloned from the pond snail, Lymnaea stagnalis. This structurally distant channel has quintessential features of T-types such as transient kinetics. LCav3 is big in many respects, such as its protein size; it expresses large macroscopic currents in human cells, it is the most abundant Ca2+ channel transcript in the snail nervous system, and it generates window currents that appear to be at least as large as those reported for mammalian channels. LCav3 provides a unique perspective to analyze the structure, function, and drug binding of T-type channels and serves as a useful surrogate in residue swapping experiments. Searches for the fundamental mechanisms that regulate this singleton invertebrate T-type channel will be facilitated by the simple molluscan preparation, where accessible and identified neurons underlying well described behaviors can be studied in isolated Lymnaea neurons, cultured synapses, or within intact, identified networks in situ. Also, LCav3 provides nourishment for evolutionary speculation. Although the first gastropods (500 million years ago) are likely quite distant from this ancestral branch point, the extant snail homolog, LCav3, is reminiscent of the gene that predates the speciation that led to the emergence of the three distinct, mammalian T-type channel genes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.064
Threshold uncertainty score0.265

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.219
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations44
Published2010
Admission routes2
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