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Enregistrement W2050714175 · doi:10.1074/jbc.m705524200

Structural Characterization of the Human Androgen Receptor Ligand-binding Domain Complexed with EM5744, a Rationally Designed Steroidal Ligand Bearing a Bulky Chain Directed toward Helix 12

2007· article· en· W2050714175 sur OpenAlexaff
Line Cantin, Frédérick Faucher, Jean‐François Couture, K. Pereira de Jesus-Tran, Pierre Legrand, Liviu C. Ciobanu, Yvon Fréchette, Richard Labrecque, Shankar M. Singh, Fernand Labrie, Rock Breton

Notice bibliographique

RevueJournal of Biological Chemistry · 2007
Typearticle
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueEstrogen and related hormone effects
Établissements canadiensUniversity of OttawaUniversité Laval
Organismes subventionnairesnon disponible
Mots-clésLigand (biochemistry)Androgen receptorChemistryHelix (gastropod)StereochemistryDomain (mathematical analysis)SteroidAndrogenReceptorCombinatorial chemistryBiophysicsBiochemistryBiologyInternal medicineMedicineProstate cancerCancer

Résumé

récupéré en direct d'OpenAlex

Antiandrogens are commonly used to treat androgen-dependent disorders. The currently used drugs unfortunately possess very weak affinity for the human AR (hAR), thus indicating the need to develop new high-affinity steroidal antiandrogens. Our compounds are specially designed to impede repositioning of the mobile carboxyl-terminal helix 12, which blocks the ligand-dependent transactivation function (AF-2) located in the AR ligand-binding domain (ARLBD). Using crystal structures of the hARLBD, we first found that H12 could be directly reached from the ligand-binding pocket (LBP) by a chain positioned the of of thus for to of very affinity for very the of the the of the chain in the of the of a new that the affinity of the of chain to the repositioning of be to the of the the to steroidal antiandrogens. Antiandrogens are commonly used to treat androgen-dependent disorders. The currently used drugs unfortunately possess very weak affinity for the human AR (hAR), thus indicating the need to develop new high-affinity steroidal antiandrogens. Our compounds are specially designed to impede repositioning of the mobile carboxyl-terminal helix 12, which blocks the ligand-dependent transactivation function (AF-2) located in the AR ligand-binding domain (ARLBD). Using crystal structures of the hARLBD, we first found that H12 could be directly reached from the ligand-binding pocket (LBP) by a chain positioned the of of thus for to of very affinity for very the of the the of the chain in the of the of a new that the affinity of the of chain to the repositioning of be to the of the the to steroidal antiandrogens. The human used human ligand-binding ligand-binding human used human ligand-binding ligand-binding human a of the of possess a of a a a ligand-binding domain of to ligand-binding pocket that the of the carboxyl-terminal 12, located in the by to directly found in the of ligand-dependent transactivation function (AF-2) H12 repositioning of that the located in helix found in the The human AR thus to the the found in in the domain of domain to for androgen-dependent to be in a of androgen-dependent which the a of the of the the in the of androgen-dependent of thus by the of by to the compounds to the of to the in could be by the that the currently very affinity for the that of be in to be thus of to develop new affinity to the of to the the the of of the of new we to of the human a to the The to a a chain to ligand-binding by of the crystal structures of the ligand-binding domain in a a the the a in the transactivation domain (AF-2) by a of the of the from the chain from the H12 from the found in the a for the crystal structures of in the that H12 the that in the that helix for the function of the of in the in the by the of the in a from the the we to to the for a chain to the by the from a for the of the chain the of the affinity of compounds for to affinity that of in the of the compounds to the of to be a to be very of thus indicating that the of the chain of for the of the of we to a of compounds in the human ligand-binding we the crystal of of compounds to the hARLBD, a a affinity for the that of chain from from the of a of in The of the by to of a a of in of the by The to the a The in a for The a by to a in in of for in affinity of for the the in of human human of the of of to the by of of by a of The for of in in a of to to the of the for The the of compounds to be from in in the of to the of in the of to the The of to for of The by of in The in the a in for in the in a The a The affinity the a The a The to of of the of the The by a of in to of the hARLBD, in the of to used to in a of for to a of used for in in a of the a The the are in of the of in the for of the used are the of from the for of the are the of in a new by the the to the The first to a of in of the from the the the to the The of the are in The of the by the for to the of for to the of to the of the we the structures we for to of that could be for the the of a by the chain of the The of the a that the the to to a located The a the by which the steroidal the of the from the The that a of H12 located in of the very that be reached directly from the to that found in the a of the the of of the The of the that of the of the chain of by a to the of which a for of for we the of a the of which be to the of the of the of the ligand-binding pocket in the of of the structures the the the The of the pocket of in the the the crystal the chain of a by of The of by the of the the of the could a chain positioned of which could the by H12 The to the we found that the of by the of the of the that the by to the of which to the of the in to the of the H12 we that a the to the of from the in the The of a of the of which unfortunately for positioned the in a to that in the that the pocket of the are very the of a chain to to the of H12 to for the of AR thus designed a of of first for to the to the of found a of the that of the a affinity the we a of very a affinity for the thus indicating that the of the chain of the of the of to that a chain positioned to the we the of a of the affinity for the in the human ligand-binding we of we a very affinity very to that of we to the of which the to a affinity the the of in of a a affinity for the chain to the for in for the the for for of the The of that of the human that to the of to the a of a thus be to be of affinity of for the human AR in a in of the of to from the human The in of for in the of the of of the for are the of of the of the The by of are the of of the the the to in in the of The in the of a of for The to the The crystal to of in very a from to for the the of the to be for the of The of of of the very of the a to the steroidal of the in the of the the of in the the of the of the in the of the in the of the are by The of of the of the in of in the of the for the which to the of the of the The the of the the steroidal of The are in in in of to the The the by of the of the steroidal of the by to the of the steroidal the of which the in are of the by the in a are are are from of to the of of the that the of the in the by the are of the of from the of the of by a of the by chain by of are the a are the the The of to the located a of a the that in the of a The of in a from that by the of the of the from the the for that the the the steroidal of are very to the the affinity of for the be to by the chain of a of crystal that the chain very by the of in the of the the of chain possess of that a that of the of located a found in of could be in by the chain of the of The of the very the affinity of for the that of of the of the of the the chain of of the the in the of the the chain of to the of the of the that to a that from that in the of the the a of the chain that the of the chain that the of to in the the the of the that to to the the of to structures by the of the chain of a very of of the of the of the the to the of the of the the of the by the to the the to the The the of the steroidal the chain of the which the chain from the of the of the in the of of a of the structures in the to a of the chain of of The of the pocket the the The in in of the of the of the the chain of of the the by the chain of to the of the of the of the a that the of the very to the structures of The of the from the the of for the of of a very the of the of very a of a of the H12 the of H12 that by the of chain of that of the that the of the of the of The very of the that the of H12 a very in the could be by the that the which we the of the chain of the to impede the of H12 the the of the chain from the of the by H12 in the of a the of the by the of the of chain in a very the H12 to a very to that in the of of H12 a function of the of the of a of the structures in the of The of which to the of the in in the chain of which the of the of H12 to the of in the H12 by in the thus that to of the of by the in the a of H12 to the from ligand-dependent transactivation function we the of directly in the the helix the of The of in a in which the of the to the by of which the of the of the structures that of are indicating the of by the chain of the very to of the crystal that for the of steroidal the that the chain the steroidal from the in a that very to that of in to affinity for the that the chain of compounds be to the the of to a a we that a chain the of a the in the to the that by H12 in the thus that chain could of of the of the the of the that could the of the of the that could new located in the of the Using new compounds be compounds a very affinity for the in of a chain a very affinity a could for new of steroidal new for of from compounds could be in to treat a of in the the could very to of compounds to to The human used human ligand-binding ligand-binding human used human ligand-binding ligand-binding human a of the of possess a of a a a ligand-binding domain of to ligand-binding pocket that the of the carboxyl-terminal 12, located in the by to directly found in the of ligand-dependent transactivation function (AF-2) H12 repositioning of that the located in helix found in the The human AR thus to the the found in in the domain of domain to for androgen-dependent to be in a of androgen-dependent which the a of the of the the in the of androgen-dependent of thus by the of by to the compounds to the of to the in could be by the that the currently very affinity for the that of be in to be thus of to develop new affinity to the of to the the the of of the of new we to of the human a to the The to a a chain to ligand-binding by of the crystal structures of the ligand-binding domain in a a the the a in the transactivation domain (AF-2) by a of the of the from the chain from the H12 from the found in the a for the crystal structures of in the that H12 the that in the that helix for the function of the of in the in the by the of the in a from Using the the we to to the for a chain to the by the from a for the of the chain the of the affinity of compounds for to affinity that of in the of the compounds to the of to be a to be very of thus indicating that the of the chain of for the of the of we to a of compounds in the human ligand-binding we the crystal of of compounds to the hARLBD, a a affinity for the that of chain from from the of a of in The of the by to of a a of in of the by The to the a The in a for The a by to a in in of for in affinity of for the the in of human human of the of of to the by of of by a of The for of in in a of to to the of the for The the of compounds to be from in in the of to the of in the of to the The of to for of The by of in The in the a in for in the in a The a The affinity the a The a The to of of the of the The by a of in to of the hARLBD, in the of to used to in a of for to a of used for in in a of the a The the are in of the of in the for of the used are the of from the for of the are the of in a new by the the to the The first to a of in of the from the the the to the The of the are in The of the by the for from from the of a of in The of the by to of a a of in of the by The to the a The in a for The a by to a in in of for in affinity of for the the in of human human of the of of to the by of of by a of The for of in in a of to to the of the for The the of compounds to be from in in the of to the of in the of to the The of to for of The by of in The in the a in for in the in a The a The affinity the a The a The to of of the of the The by a of in to of the hARLBD, in the of to used to in a of for to a of used for in in a of the a The the are in by the the to the The first to a of in of the from the the the to the The of the are in The of the by the for to the of for to the of to the of the we the structures we for to of that could be for the the of a by the chain of the The of the a that the the to to a located The a the by which the steroidal the of the from the The that a of H12 located in of the very that be reached directly from the to that found in the a of the the of of the The of the that of the of the chain of by a to the of which a for of for we the of a the of which be to the of the of the the crystal the chain of a by of The of by the of the the of the could a chain positioned of which could the by H12 The to the we found that the of by the of the of the that the by to the of which to the of the in to the of the H12 we that a the to the of from the in the The of a of the of which unfortunately for positioned the in a to that in the that the pocket of the are very the of a chain to to the of H12 to for the of AR thus designed a of of first for to the to the of found a of the that of the a affinity the we a of very a affinity for the thus indicating that the of the chain of the of the of to that a chain positioned to the we the of a of the affinity for the in the human ligand-binding we of we a very affinity very to that of we to the of which the to a affinity the the of in of a a affinity for the chain to the for in for the the for for of the The of that of the human that to the of to the a of a thus be to be of affinity of for the human AR in a in of the of to from the human The in of for in the of the of of the for are the of of the of the The by of are the of of the the the to in in the of The in the of a of for The to the The crystal to of in very a from to for the the of the to be for the of The of of of the very of the a to the steroidal of the in the of the the of in the the of the of the in the of the in the of the are by The of of the of the in of in the of the for the which to the of the of the The the of the the steroidal of The are in in in of to the The the by of the of the steroidal of the by to the of the steroidal the of which the in are of the by the in a are are are from of to the of of the that the of the in the by the are of the of from the of the of by a of the by chain by of are the a are the the The of to the located a of a the that in the of a The of in a from that by the of the of the from the the for that the the the steroidal of are very to the the affinity of for the be to by the chain of a of crystal that the chain very by the of in the of the the of chain possess of that a that of the of located a found in of could be in by the chain of the of The of the very the affinity of for the that of of the of the of the the chain of of the the in the of the the chain of to the of the of the that to a that from that in the of the the a of the chain that the of the chain that the of to in the the the of the that to to the the of to structures by the of the chain of a very of of the of the of the the to the of the of the the of the by the to the the to the The the of the steroidal the chain of the which the chain from the of the of the in the of of a of the structures in the to a of the chain of of The of the pocket the the The in in of the of the of the the chain of of the the by the chain of to the of the of the of the a that the of the very to the structures of The of the from the the of for the of of a very the of the of very a of a of the H12 the of H12 that by the of chain of that of the that the of the of the of The very of the that the of H12 a very in the could be by the that the which we the of the chain of the to impede the of H12 the the of the chain from the of the by H12 in the of a the of the by the of the of chain in a very the H12 to a very to that in the of of H12 a function of the of the of a of the structures in the of The of which to the of the in in the chain of which the of the of H12 to the of in the H12 by in the thus that to of the of by the in the a of H12 to the from ligand-dependent transactivation function we the of directly in the the helix the of The of in a in which the of the to the by of which the of the of the structures that of are indicating the of by the chain of the very to of the crystal that for the of steroidal the that the chain the steroidal from the in a that very to that of in to affinity for the that the chain of compounds be to the the of to a a we that a chain the of a the in the to the that by H12 in the thus that chain could of of the of the the of the that could the of the of the that could new located in the of the Using new compounds be compounds a very affinity for the in of a chain a very affinity a could for new of steroidal new for of from compounds could be in to treat a of in the the could very to of compounds to to to the of for to the of to the of the we the structures we for to of that could be for the the of a by the chain of the The of the a that the the to to a located The a the by which the steroidal the of the from the The that a of H12 located in of the very that be reached directly from the to that found in the a of the the of of the The of the that of the of the chain of by a to the of which a for of for we the of a the of which be to the of the of the the crystal the chain of a by of The of by the of the the of the could a chain positioned of which could the by H12 The to the we found that the of by the of the of the that the by to the of which to the of the in to the of the H12 we that a the to the of from the in the The of a of the of which unfortunately for positioned the in a to that in the that the pocket of the are very the of a chain to to the of H12 to for the of AR thus designed a of of first for to the to the of found a of the that of the a affinity the we a of very a affinity for the thus indicating that the of the chain of the of the of to that a chain positioned to the we the of a of the affinity for the in the human ligand-binding we of we a very affinity very to that of we to the of which the to a affinity the the of in of a a affinity for the chain to the for in for the the for for of the The of that of the human that to the of to the a of a thus be to be of of the the the to in in the of The in the of a of for The to the The crystal to of in The very a from to for the the of the to be for the of The of of of the very of the a to the steroidal of the in the of the the of in the the of the of to the of of the that the of the in the by the are of the of from the of the of by a of the by chain by of are the a are the the The of to the located a of a the that in the of a The of in a from that by the of the of the from the the for that the the the steroidal of are very to the the affinity of for the be to by the chain of a of crystal that the chain very by the of in the of the the of chain possess of that a that of the of located a found in of could be in by the chain of the of The of the very the affinity of for the that of of the of the of the the chain of of the the in the of the the chain of to the of the of the that to a that from that in the of the the a of the chain that the of the chain that the of to in the the the of the that to to the the of to structures by the of the chain of a very of of the of the of the the to the of the of the the of the by the to the the to the The the of the steroidal the chain of the which the chain from the of the of the of the the chain of of the the by the chain of to the of the of the of the a that the of the very to the structures of The of the from the the of for the of of a very the of the of very a of a of the H12 the of H12 that by the of chain of that of the that the of the of the of The very of the that the of H12 a very in the could be by the that the which we the of the chain of the to impede the of H12 the the of the chain from the of the by H12 in the of a the of the by the of the of chain in a very the H12 to a very to that in the of the of H12 to the of in the H12 by in the thus that to of the of by the in the a of H12 to the from ligand-dependent transactivation function we the of directly in the the helix the of The of in a in which the of the to the by of which the of the of the structures that of are indicating the of by the chain of the very to of the crystal that for the of steroidal the that the chain the steroidal from the in a that very to that of in to affinity for the that the chain of compounds be to the the of to a a we that a chain the of a the in the to the that by H12 in the thus that chain could of of the of the the of the that could the of the of the that could new located in the of the Using new compounds be compounds a very affinity for the in of a chain a very affinity a could for new of steroidal new for of from compounds could be in to treat a of in the the could very to of compounds to to for of the for

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Expérimental (laboratoire) · Signal consensuel: Expérimental (laboratoire)
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,009
Score d'incertitude au seuil0,467

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,014
Tête enseignante GPT0,235
Écart entre enseignants0,221 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeExpérimental (laboratoire)
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations67
Publié2007
Routes d'admission1
Résumé présentoui

Explorer davantage

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