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Enregistrement W2113647194 · doi:10.1002/jmri.24567

How much net gain does a diagnostic imaging test provide?

2014· letter· en· W2113647194 sur OpenAlexaffabout
Gilat L. Grunau, Peter Grunau, Shai Linn, Jonathon Leipsic

Notice bibliographique

RevueJournal of Magnetic Resonance Imaging · 2014
Typeletter
Langueen
DomaineMathematics
ThématiqueStatistical Methods in Clinical Trials
Établissements canadiensSt. Paul's HospitalUniversity of British Columbia
Organismes subventionnairesnon disponible
Mots-clésPre- and post-test probabilityDiagnostic testTest (biology)PopulationDiseasePredictive valueStatisticsMedicineHeston modelEconometricsComputer scienceInternal medicineMathematicsPediatricsEnvironmental health

Résumé

récupéré en direct d'OpenAlex

Heston 1 describes the importance of prevalence in order to judge the utility of a diagnostic test. Heston 1 recommended standardizing predictive values to a prevalence of 50%. We take this one step further and present the concept of gain of a diagnostic test and the Predictive Summary Index (PSI), which uses the prevalence of a disease in the population of interest in order to standardize the predictive values. The PSI derivation is explained, and we show that it represents the net gain in information from a diagnostic test. Heston 1 comments on an important issue when assessing diagnostics tests: the need to know the overall prevalence of the disease in the population under investigation in order to make judgment of the utility of a diagnostic test. As correctly illustrated by Heston 1, altering the pretest probability affects the posttest probability. Heston 1 suggests that a better way to present the predictive value would be to standardize it to a 50% disease prevalence in order to reduce prevalence bias when comparing diagnostic tests. We suggest taking this one step further. Why limit standardization to 50%? The new measure, the PSI 2, can be used as a relevant summary measure to show the net gain in information beyond the prevalence of the disease. The positive predictive value (PPV) could be meaningful and supply information only if it is greater than the prevalence of the disease, which could be estimated based on pretest likelihood of disease. Thus, the additional information that is obtained from a given diagnostic test is the gain in information after a positive test which is G+ = PPV − prevalence. The negative predictive value (NPV) could be meaningful and supply information only if it is greater than the prevalence of the lack of a disease (which equals 1 − the prevalence of a disease) which could be our first guess of a lack of a disease in a patient without performing any test. The gain in information after a negative test is G− = NPV− (1−prevalence). The PSI 2 takes both of these gain measures into account. PSI is calculated as: As shown, PSI is actually measuring the net gain in information (for positive and negative results) obtained for a diagnostic test beyond the prevalence of the disease. To take it one step further, in the clinical setting a False Positive Rate (FPR) of a test is FPR = 1−PPV and False Negative Rate (FNR) is FNR = 1−NPV. Thus, PSI can also be expressed as PSI = 1− (FPR+FNR). PSI is therefore a summary of the error-free diagnostic capabilities of a test for a disease or its absence. A PSI of 1 indicates an ideal test without errors in diagnosing a disease or its absence; a PSI of 0 indicates an uninformative test with an error rate that equals the diagnosis rate. PSI of −1 indicates a misleading test that always diagnoses a disease incorrectly. Based on data by Pilz et al. 3 and the example by Heston 1, we can use the data below, using cardiac magnetic resonance imaging (CMR) compared to the gold standard coronary angiography (CA) (Table 1). The sensitivity, specificity, PPV, and NPV are 84%, 55%, 20%, 96%, respectively. These predictive values are only relevant to the patient population with the overall prevalence of 38/316 = 12%. The PSI = 0.16 indicating an overall gain in information of 16%. For purposes of illustration, let's apply this to a population with prevalence of 50% using the same sensitivity and specificity. This would yield a PPV, NPV, PSI of 65%, 77%, and 0.42, respectively (thus a net gain in information of 42%). For a population with prevalence of 75% (as done in Henson 1), again using the same sensitivity and specificity, the PPV, NPV, and PSI will be 85%, 47%, and 0.32 (thus a net gain of information of 32%). As seen by this mathematical exercise, the overall gain in information from a diagnostic test is strictly dependent on prevalence. Furthermore, we suggest that the PSI is much more informative than reporting a generic standardized predictive value to an arbitrary prevalence of 50% 1, given the PSI varies based on the prevalence in the population of interest. Gilat Grunau, PhD1 Peter Grunau, MD2 Shai Linn, MD, PhD3 Jonathon Leipsic, MD1,4 1Department of Radiology University of British Columbia Vancouver, BC, Canada 2Department of Orthopedic Surgery University of British Columbia Vancouver, BC, Canada 3School of Public Health University of Haifa Haifa, Israel 4Department of Medical Imaging St Paul's Hospital Vancouver, BC, Canada

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,007
score de la tête « metaresearch » (Gemma)0,437
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesMétarecherche, Méta-épidémiologie (sens strict), Intégrité de la recherche
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Sans objet · Signal consensuel: Sans objet
GenreSignal candidat: Commentaire · Signal consensuel: aucune
Score de désaccord entre enseignants0,661
Score d'incertitude au seuil1,000

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0070,437
Méta-épidémiologie (sens strict)0,0010,001
Méta-épidémiologie (sens large)0,0030,001
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,001
Communication savante0,0010,000
Science ouverte0,0020,000
Intégrité de la recherche0,0000,005
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,142
Tête enseignante GPT0,430
Écart entre enseignants0,288 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule tête enseignante, pas un consensus.

Devis d'étudeSans objet
Domainenon disponible
GenreCommentaire

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations1
Publié2014
Routes d'admission2
Résumé présentoui

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