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Enregistrement W4386427389 · doi:10.1002/ndr2.12210

First report of an aggressive species of <i>Neopestalotiopsis</i> affecting strawberry in Canada

2023· article· en· W4386427389 sur OpenAlex

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Notice bibliographique

RevueNew Disease Reports · 2023
Typearticle
Langueen
DomaineBiochemistry, Genetics and Molecular Biology
ThématiquePlant Pathogens and Fungal Diseases
Établissements canadiensMinistry of Agriculture, Food and Rural AffairsUniversity of Guelph
Organismes subventionnairesMinistry of Agriculture, Food and Rural AffairsOntario Ministry of Agriculture, Food and Rural Affairs
Mots-clésConidiumBiologyPotato dextrose agarMyceliumBotanyInoculationHorticultureAgarSpots

Résumé

récupéré en direct d'OpenAlex

In October 2020, Pestalotiopsis-like disease symptoms were observed in a one-acre field of strawberry (Fragaria × ananassa cv. Albion) located in Ontario, Canada. Symptoms appeared as light brown necrotic lesions surrounded by darker red-brown haloes on leaves, black fruiting bodies, and wilt. Disease incidence in the field was 40% and a further 5% of the plants were dead (Figure 1, 2 & 3). One lesion was isolated from the crown tissue of six actively collapsing plants. Lesions were sterilized with 0.5% sodium hypochlorite for one minute, rinsed twice for five minutes in 50 ml sterile water, and placed on 1.5% water agar. Following two days of incubation at 24°C, single hyphal tips were transferred to potato dextrose agar and incubated at 24°C for seven days. Fungi were isolated from four of the six plants. Cultures had a white, cottony mycelium upper surface and a white to pale orange lower surface. Black viscous acervuli appeared on the upper surface of the colonies before day 14. Conidia were five-celled, fusiform to ellipsoid and 23.0-25.1 μm long and 7.2-7.4 μm wide (n = 30). DNA was extracted from seven-day old cultures and the internal transcribed spacer (ITS) region, β-tubulin, and translation elongation factor 1-alpha were amplified using PCR (Maharachchikumbura et al., 2014). Amplified products were sequenced in both directions and sequences deposited in GenBank (Accession Nos. OQ731784, OQ731785 and OR002051, respectively). Amplified products from all four cultures shared 100% nucleotide identity. The genomic sequence data shared 100% nucleotide identity with the aggressive Neopestalotiopsis species that was first reported in North America (Baggio et al., 2021). Sequence identities include 375/375 bp for the ITS, 381/381 bp β-tubulin, and 588/588 bp for the translation elongation factor 1-alpha. To fulfill Koch's postulates, three four-week-old strawberry cv. Montana plants were spray inoculated until run-off with 1×104 conidia/ml from the fungus isolated from a crown sample or sterile distilled water. Spore suspensions were obtained from seven-ten-day old colonies and all experiments were repeated three times. Experimental plants were grown under controlled environmental conditions at 85% humidity, 12 hour photoperiod of 24°C day/22°C night and light levels of 100μE.m2s−1. After 5–14 days following inoculation, all of the plants inoculated with the fungus exhibited foliar lesions and fruiting bodies with conidia (Figure 4). Plants sprayed with sterile distilled water did not show any symptoms. Fungi were re-isolated from a single spore in all plants inoculated with fungi but not from those plants sprayed with sterile distilled water. DNA was extracted from the re-isolated fungi and subject to PCR amplification and sequencing, as described above. The DNA sequence from all three loci had 100% sequence identity to the original ITS, β-tubulin, and translation elongation factor 1-alpha loci. This is the first time that the aggressive species of Neopestalotiopsis, previously reported in the United States (Baggio et al., 2021; Rotondo et al., 2022; Guan et al., 2023) has been reported in Canada. We thank the Berry Growers of Ontario and Ontario Ministry of Agriculture, Food and Rural Affairs for supporting this work.

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Prédiction distillée sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Apprise à partir de 10 348 étiquettes directes de Codex et de 10 348 étiquettes directes de Gemma. Le mode candidate est l'union des têtes enseignantes seuillées; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont ni des étiquettes humaines ni des étiquettes directes de modèles de pointe.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: codex-gemma-dda1882f352aStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Observationnel · Signal consensuel: Observationnel
GenreSignal candidat: Empirique · Signal consensuel: Empirique
Score de désaccord entre enseignants0,272
Score d'incertitude au seuil0,880

Scores Codex et Gemma par catégorie

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0000,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0000,000
Études des sciences et des technologies0,0000,000
Communication savante0,0000,000
Science ouverte0,0000,000
Intégrité de la recherche0,0000,000
Charge utile insuffisante (le modèle a refusé de juger)0,0000,000

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,009
Tête enseignante GPT0,223
Écart entre enseignants0,213 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle