P0125 Crohn’s-associated invariant T Cells are associated with disease severity and location and are not affected by medication intake
Notice bibliographique
Résumé
Abstract Background Multiple alterations in the immune repertoire of IBD patients have been identified including, an expansion of a subset of type II natural killer T cells in CD patients, termed Crohn’s-associated invariant T cells (CAIT)1. Previously, we showed that CAIT cells respond to small molecules that resemble multiple microbial and drug metabolites2. This begs the question of whether CAIT cells are expanded due to the ongoing disease or the medications administrated to control the disease. Methods We profiled the T cell receptor alpha chain repertoire of 246 symptomatic controls, 228 treatment-naïve CD and 357 UC patients in addition to 176 and 329 treated CD and UC patients, respectively, from the Norwegian inception cohort IBSEN III3. Results Given that our cohort contained adult and paediatric IBD patients, we initially analysed the expansion of CAIT cells independently. Among adults, CAIT cells were significantly expanded in treatment-naïve CD patients (Fig. 1A) with a similar trend in paediatric patients (Fig. 1B) which arguably due to the small sample size was not significant. By combing the two groups, we observed a higher expansion of CAIT cells in treatment-naïve CD patients (Fig. 1C). The expansion of CAIT cells was also higher in treated-CD patients relative to controls and treated UC patients (Fig. 1D). By comparing the T cell repertoire of the UC and CD patients before and after treatment, we did not observe any significant difference in the expansion of CAIT cells due to medications (Fig. 1E, 1F). CAIT cells were significantly expanded in ileocolonic and ileal CD patients relative to colonic CD patients and controls (Fig. 2A). This effect persisted in treated patients (Fig. 2B), additionally, the expansion of CAIT cells did not differ significantly in the same patient before treatment and after treatment (Fig. 2C). The expansion also correlated with the disease-behavior4, with patients suffering from a stricturing CD showing higher levels of CAIT expansion relative to controls and CD patients with non-stricturing, non-penetrating (NSNP) disease (Fig. 2D). After treatment, patients with a stricturing disease had a higher CAIT expansion relative to controls and also to NSNP patients (Fig. 2E). By comparing the expansion of CAIT cells in CD patients with NSNP disease before and after treatment, we did not observe any significant difference (Fig. 2F). Conclusion Our results indicate that CAIT cells are not induced by treatment and that disease severity and location strongly correlates with their expansion, future efforts shall focus on identifying the spatial distribution of CAIT cells in the gut tissues as well as identifying potential antigens driving their expansion. References 1.Rosati E., Martini GR., Pogorelyy M V., Minervina AA., Degenhardt F., Wendorff M., et al. A novel unconventional T cell population enriched in Crohn’s disease. Gut 2022;71(11):2194 LP – 2204. Doi: 10.1136/gutjnl-2021-325373. 2.Minervina AA., Pogorelyy M V., Paysen S., Luening U., Degenhardt F., Franke A., et al. Crohn’s-associated invariant T cells (CAITs) recognise small sulfonate molecules on CD1d. Gut 2022:gutjnl-2022-328684. Doi: 10.1136/gutjnl-2022-328684. 3.Kristensen VA., Opheim R., Perminow G., Huppertz-Hauss G., Detlie TE., Lund C., et al. Inflammatory bowel disease in South-Eastern Norway III (IBSEN III): a new population-based inception cohort study from South-Eastern Norway. Scand J Gastroenterol 2021;56(8):899–905. Doi: 10.1080/00365521.2021.1922746. 4.Satsangi J., Silverberg MS., Vermeire S., Colombel J-F. The Montreal classification of inflammatory bowel disease: controversies, consensus, and implications. Gut 2006;55(6):749. Doi: 10.1136/gut.2005.082909.
Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.
Comment cette classification a été obtenuedéplier
Prédiction machine sur la base complète
Imitation des enseignantsNi prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.
Scores du classifieur distillé par catégorie (deux têtes)
| Catégorie | Codex | Gemma |
|---|---|---|
| Métarecherche | 0,000 | 0,001 |
| Méta-épidémiologie (sens strict) | 0,000 | 0,000 |
| Méta-épidémiologie (sens large) | 0,000 | 0,000 |
| Bibliométrie | 0,000 | 0,001 |
| Études des sciences et des technologies | 0,000 | 0,000 |
| Communication savante | 0,000 | 0,000 |
| Science ouverte | 0,000 | 0,000 |
| Intégrité de la recherche | 0,000 | 0,000 |
| Charge utile insuffisante (le modèle a refusé de juger) | 0,006 | 0,001 |
Scores machine (provisoires)
Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.
Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.
score_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découleClassification
machine, non validéePrédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.
Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».