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Enregistrement W6931480049 · doi:10.5281/zenodo.6069371

Egmundella producta G.O. Sars 1874

2016· article· de· W6931480049 sur OpenAlexaboutno aff

Notice bibliographique

RevueZenodo (CERN European Organization for Nuclear Research) · 2016
Typearticle
Languede
DomaineBiochemistry, Genetics and Molecular Biology
ThématiqueGene expression and cancer classification
Établissements canadiensnon disponible
Organismes subventionnairesnon disponible
Mots-clésSequence (biology)Gene sequenceCoronavirus disease 2019 (COVID-19)Population

Résumé

récupéré en direct d'OpenAlex

Egmundella producta (G.O. Sars, 1874) Calycella producta G.O. Sars, 1874: 118, pl. 5 figs 6-8. ‒ Hincks, 1874a: 134. ‒ Verrill, 1879: 17. ‒ Storm, 1879: 26. ‒ Broch, 1907: 7. Manuscript accepted 0 3.02. 2016 DOI: 10.5281/zenodo.155157 Lovenella producta. ‒ Segerstedt, 1889: 12. ‒ Jäderholm, 1909: 79. ‒ Kramp, 1935: 140, fig. 57E. ‒ Fraser, 1937: 96, pl. 19 fig. 102. ‒ Fraser, 1944: 175, pl. 31 fig 149. ‒ Schuchert, 2000: 423. ‒ Schuchert, 2001: 54, fig. 39. ‒ Calder, 2012: 22, fig. 21. Campanulina producta. ‒ Bonnevie, 1899: 73. ‒ Bonnevie, 1901:10. ‒ Broch, 1903: table. ‒ Stechow, 1922: 146. not Lovenella producta. ‒ Fraser, 1911: 44, pl. 3 figs 7-10. ‒ Fraser, 1914: 159, pl. 18 fig. 64. [in part Egmundella gracilis Stechow, 1921] ? Lovenella producta. ‒ Fraser, 1938: 40. ? not Campanulina producta. ‒ Leloup, 1940: 8, pl. 1 fig. 4. ? Egmundella grimaldii Leloup, 1940: 7, pl. 1 fig. 3. ? not Opercularella producta. ‒ Vervoort, 1966: 111, fig. 12a. ‒ Verwoort, 1985: 279. Material examined: Syntypes, UZMO B1378, Sars collection, as Calycella producta; Norway, Bodø and Lofoten, 80-100 f (= 146-183); identified by G. O. Sars, numerous hydranths, relatively well preserved. MHNG-INVE-91796; Norway, North of Litlesotra Island, 60.4083°N 05.1167°W, 100 m depth, on tube of Sabella pavonia; collected 22.04.2015; with 3 gonothecae; part of this material processed to permanent microslide preparations; DNA isolate 1097 made from a few hydranths, 16S sequence KU512889; DNA isolate 1098 made from a gonotheca content, 16S sequence identical to KU512889. MHNG-INVE-25136; Iceland, 64.842°N 24.217°W, 220 m depth, temperature 7.1°C; collection date 0 5.09.1990. ZMUC BIOFAR 100; Faroe Islands, 61.5878°N 6.2847°W, 283 m depth, temperature 6.8°C; collected 24.07.1987; without gonothecae. ZMUC BIOFAR 165; Faroe Islands, 62.1844°N 4.9667°W, 184 m depth, temperature 7.9°C, on hydroids; collected 07.05.1988; without gonothecae. ZMUC BIOFAR 517; Faroe Islands, 60.6039°N 11.6364°W, 1099 m depth, temperature 5.6°C; collected 27.07.1989; without gonothecae. ZMUC BIOFAR 523; Faroe Islands, 60.7114°N 12.6075°W, 606 m depth, temperature 8.5°C, on polychaete tube made of sand grains; collected 28.07.1989; without gonothecae. ZMUC BIOFAR 524; Faroe Islands, 0.7364°N 12.6222°W, 702 m depth, temperature 7.9°C, on hydroid Symplectoscyphus tricuspidatus; collected 28.07.1989; without gonothecae. Description: Colony stolonal, stolons tubular, diameter 90-140 μm, irregularly corrugated, ramified, creeping, forming a reticulated network. Stolons usually bear on upper surface a row of widely spaced nematothecae, number variable between colonies, nematothecae about 60-100 μm high, on short pedicels, bodies egg-shaped, distally truncate, lumen filled with large haplonemes (Fig. 1 B). The hydrothecae are not evenly distributed and tend to arise in clusters of 3-6, total height of hydrotheca and pedicel very variable 3-6 mm (Fig. 1 A), diameters of pedicels 80-90 μm. Pedicels straight, smooth for the most part but regularly some short, annulated stretches present, this especially at base. Hydrotheca elongate, height 0.5-0.8 mm from diaphragm to operculum tip, walls thin, widest at base of operculum (diameter 0.28-0.32 mm), tapering towards below, and basally merging imperceptibly into pedicel, with no node at base of hydrotheca. Operculum low, conical, formed by about 10-12 triangular flaps. In fresh and alcohol preserved material, the operculum is not delimited from the hydrothecal wall by a crease line. A crease line can appear when the operculum is inwardly folded into the hydrotheca (Fig. 1 A). Towards base of hydrotheca a very fine, membranous, funnelshaped diaphragm, which is only discernible while there is a living polyp in the hydrotheca. Gonothecae arise directly from stolons (Fig. 1 C, E), fanshaped, strongly flattened (Fig. 1 F), the thickness of the gonotheca in the proximal part is about 1/8 to 1/10 of the height, thinning out towards the periphery, with a large opening spanning from one side to the other (Fig. 1 E-F), margin of opening irregularly serrated, possibly resulting from rupture of perisarc at maturity, lower walls of gonotheca undulated, pedicel short. Size of gonotheca variable, observed range (n=3, newly collected material) was 1.5 x 1.7 mm to 4.4 x 4.6 mm (height x maximal width). Only largest gonotheca contained soft tissue, represented by a very young and an advanced gonophore, gonophore a medusoid or a medusa. Nematocysts: - large merotrichous and atrichous haplonemes (Fig. 3 A-B, E-F), concentrated in nematothecae but also present in hydranths, stolons and gonophores, (31-35) x (3.5-4) μm, straight or curved, thread of discharged capsules thin, tapering inconspicuously, some capsules without barbs (Fig. 3 F), some with a stretch of about 30 μm beset with strong barbs, about 40 μm away from capsule (Fig. 3 E). - spindle shaped isorhizas (Fig. 3 C), concentrated in tentacles, but also elsewhere, (7.5-9) x (1.5-2) μm, in light microscopy lacking visible spines. - rare, small, unidentifiable capsules (Fig. 3 D), (4-5) x (1-1.5) μm, may be developmental stages. Biology: Grows on a variety of substrates like other hydroids (especially Tubularia indivisa), tubes of polychaetes, and ascidians. Depth range of reliablyidentified material 6-750 m, usually below 80 m in boreal regions. Distribution: In cool temperate to cold waters of the North Atlantic, rarely reported from the high Arctic: Norway (Sars, 1874; Storm, 1879; Bonnevie, 1899, 1901), Sweden (Segerstedt, 1889), Denmark (Kramp, 1935), North Sea (Broch, 1903), Iceland (Schuchert, 2000, 2001), North-western Atlantic (Verrill, 1879; Fraser, 1944). The identities of records from deep waters of the Gulf of Gascogne and the Azores (Leloup, 1940; Vervoort, 1985) are uncertain. Not reported so far from the Russian Arctic Sea (Antsulevich, 2015) or other high arctic waters (Ronowicz et al., 2015), except for one record by Broch (1907) from the Jones Sound (south of Ellesmere Island, Canada). Type localities: Norway, Nordland county, Bodø and Lofoten Islands, 146-366 m depth, on Tubularia indivisa and a serpulid tube. Remarks: The presence or absence of nematothecae in campanulinid hydroids is usually considered to be a genus level difference (Levinsen, 1893; Jäderholm, 1909; Stechow, 1921; Bouillon et al., 2006). The genus Lovenella Hincks, 1868 has as type species Campanularia clausa Lovén, 1836 by monotypy, a species with no stolonal nematothecae. Contemporary authors (e. g. Cornelius, 1995a; Schuchert, 2001; Calder, 2012) did nevertheless not apply this and continued to use the combination Lovenella producta (G.O. Sars, 1874), despite the fact that nematothecae were always found. The reason for doing so was because the species remained incompletely described and it was assumed that the type material does not have stolonal nematothecae as these were not mentioned by Sars (1874). However, the re-examination of the syntypes showed that stolonal nematothecae are present in both of them. According to Bouillon et al. (2006) ‒ currently the most comprehensive and widely accepted taxonomic system of the Hydrozoa ‒ the species must thus be placed in the genus Egmundella Stechow, 1921 (Stechow, 1921: 225; type species Egmundella gracilis Stechow, 1921 by original designation). A comparison with the syntype specimens made it evident that the new material from Norway is indistinguishable from them, the hydrothecae being only slightly shorter. The syntype material, as already stated by Sars (1874), is composed of specimens from at least two localities (Bodø and Lofoten Islands), each attached to a different substrate (Tubularia indivisa stem fragments and a serpulid tube fragment, respectively). The material is relatively well preserved, though most hydrothecae are damaged. The stolons bear numerous nematothecae, although their local density is variable. Since they were not mentioned by Sars (1874), it is assumed that he must have overlooked them. Considering the quality of the optical instruments available at his time, this is not surprising, as they are inconspicuous structures that need a careful examination to be discovered. Sars (1874) stated that the type material had no gonothecae. However, I found one small (1 mm), developing gonotheca on the colony growing on the serpulid tube. The gonotheca is comparatively smaller, but otherwise morphologically similar to those observed in the new material (Fig. 1 C, 2C). The gonotheca in the type material seems to be a younger stage than the one depicted in Fig. 1 C and apparently there is no opening yet. There is a visible gonophore inside it, but no internal structures could be identified. Unfortunately, the content of the gonotheca in the new material could not be identified with sufficient precision. The material had to be preserved immediately because the tissues started to deteriorate due to damage suffered during the collecting process. Only the largest gonotheca contained soft tissue, represented by one advanced gonophore and a very young one. The gonophore was provisionally identified as a medusoid with developed gonads, but it is not excluded that it could further develop into a medusa with tentacles. New observations based on living colonies are needed. The shape of the gonothecae observed in the material of the present study matches only partially Storm’s (1879) description. Storm mentions a short aperture, while in the present material there is a wide distal opening. Without any illustration of Storm’s material it is difficult to assess its validity and significance. Also Vervoort (1985, as Verwoort) described gonothecae in material he tentatively identified as L. producta: “... hyaline, sacshaped body, about as long as the hydrothecal pedicel and attached to the stolon by means of a very short collarshaped pedicel. The lateral wall is slightly wrinkled; terminally it is open, with a slightly folded apical portion ...”. Also this descri

Récupéré en direct depuis OpenAlex et désinversé. Les résumés ne sont pas conservés dans cette base de données : les index inversés représentent 8,6 Go des 9,3 Go de texte de la base, et le serveur dispose de 13 Go libres.

Comment cette classification a été obtenuedéplier

Prédiction machine sur la base complète

Imitation des enseignants

Ni prévalence calibrée, ni vérité terrain. Validation humaine à venir. Le volet Gemma est une étiquette directe du modèle pour chaque travail de la base, lue sur la notice réduite au titre. Le volet Codex est un classifieur appris des 10 348 étiquettes directes de Codex et calibré sur les taux pondérés de l'échantillon; les champs sans appui suffisant ne portent aucun appel Codex. Le mode candidate est l'union des deux volets; le consensus est leur intersection. Ces sorties portent le statut machine_predicted_unvalidated et ne sont pas des étiquettes humaines.

score de la tête « metaresearch » (Codex)0,000
score de la tête « metaresearch » (Gemma)0,000
Version: metacan-v3-hybrid-931329e0061cStatut de validation: machine_predicted_unvalidated
Catégories candidatesaucune
Catégories consensuellesaucune
DomaineSignal candidat: aucune · Signal consensuel: aucune
Devis d'étudeSignal candidat: Observationnel · Signal consensuel: aucune
GenreSignal candidat: Empirique · Signal consensuel: aucune
Score de désaccord entre enseignants0,010
Score d'incertitude au seuil0,033

Scores du classifieur distillé par catégorie (deux têtes)

CatégorieCodexGemma
Métarecherche0,0000,000
Méta-épidémiologie (sens strict)0,0010,000
Méta-épidémiologie (sens large)0,0000,000
Bibliométrie0,0010,001
Études des sciences et des technologies0,0010,000
Communication savante0,0000,001
Science ouverte0,0000,001
Intégrité de la recherche0,0000,001
Charge utile insuffisante (le modèle a refusé de juger)0,0100,003

Scores machine (provisoires)

Les deux têtes enseignantes du modèle étudiant, lues sur ce travail. Un score ordonne la base pour la relecture; il n'affirme jamais une catégorie, et le statut de validation accompagne chaque rangée tel quel.

Scores de référence d'un modèle non mature (critères de maturité non atteints, 7 itérations). Un score ordonne; il n'affirme jamais une catégorie.

Tête enseignante Opus0,032
Tête enseignante GPT0,253
Écart entre enseignants0,221 · la distance entre les deux têtes enseignantes sur ce seul travail
Statut de validationscore_only:v0-immature-baseline · tel quel depuis la passe de notation : score_only signifie que le nombre peut ordonner les travaux, et qu'aucune étiquette de catégorie n'en découle

Classification

machine, non validée

Prédiction automatique; un appel candidat d’une seule source (Gemma direct ou Codex distillé), pas un consensus.

Les modèles n’ont appliqué aucune catégorie : rien dans la taxonomie ne correspondait à ce travail.
Devis d'étudeObservationnel
Domainenon disponible
GenreEmpirique

Le détail, modèle par modèle et score par score, se trouve en fin de page sous « Comment cette classification a été obtenue ».

En bref

Citations0
Publié2016
Routes d'admission1
Résumé présentoui

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