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Doxorubicin‐induced Activation of Intracellular Matrix Metalloproteinase‐2 by Oxidative Stress

2015· article· en· W1016622065 on OpenAlexaff
Brandon Chan, Bryan Hughes, Richard Schulz

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtease and Inhibitor Mechanisms
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsIntracellularOxidative stressMatrix metalloproteinaseHT1080DoxorubicinChemistryExtracellularCell biologyBiochemistryBiologyMedicineCellInternal medicineChemotherapy

Abstract

fetched live from OpenAlex

Matrix metalloproteinase‐2 (MMP‐2) activity is involved in several heart pathologies resulting from increased oxidative stress including ischemia‐reperfusion injury. In addition to its roles in extracellular matrix remodeling, MMP‐2 is also an intracellular protease with specific intracellular substrates. MMP‐2 mRNA and protein levels are elevated in cancer patients treated with doxorubicin (DXR). Though effective in chemotherapy, DXR's dose‐limiting cardiotoxicity may cause heart failure by activating intracellular MMP‐2. Human fibrosarcoma cells (HT1080 cells) and neonatal rat ventricular myocytes (NRVM) were treated with 0.01‐1 μM DXR for 0.5 and 2 h at 37°C. DXR treatment had no effect on cell viability. MMP‐2 activity and protein levels were measured by gelatin zymography and immunoblotting, respectively. Oxidative stress was measured by changes in mitochondrial aconitase activity. To visualize changes in intracellular MMP‐2 activity in real time, we will use a genetically encoded, fluorescence resonance energy transfer (FRET)‐based biosensor. In HT1080 cells 0.1‐1 μM DXR stimulated a 1.6 fold increase in intracellular MMP‐2 activity after 2 h without changing its protein level. DXR had no effect on MMP‐2 activity in NRVM. The FRET‐based MMP‐2 biosensor detected MMP but not other intracellular proteases, such as calpains and caspases, in vitro . In human cancer cells, acute treatment with DXR activates intracellular MMP‐2. The biosensors are now being expressed in cells to directly study intracellular MMP‐2 activity. The FRET‐based biosensor will allow us to better understand how oxidative stress stimuli affects intracellular MMP‐2 activity and its specific substrates.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.254
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2015
Admission routes1
Has abstractyes

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