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The RNA virus sensor melanoma differentiation-associated protein 5 mitigates protection from Coxsackievirus B4 and type 1 diabetes in non-obese diabetic mice. (P5211)

2013· article· en· W109151256 on OpenAlexaff
Pamela J. Lincez, Iryna Shanina, Marc S. Horwitz

Bibliographic record

VenueThe Journal of Immunology · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
Topicinterferon and immune responses
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsBiologyMDA5Type 1 diabetesCoxsackievirusImmunologyNodAutoimmunityVirologyVirusEnterovirusRNAImmune systemGeneticsEndocrinologyDiabetes mellitusRNA interferenceGene

Abstract

fetched live from OpenAlex

Abstract Type 1 diabetes is a pancreatic autoimmune disease affecting children and results from both genetic and environmental factors where coxsackievirus B4 (CB4) is the most associated pathogen. Genome-wide association studies have linked variants in MDA5, an RNA virus sensor, with T1D protection. As CB4 is an RNA virus and a likely factor in T1D etiology, we chose to use CB4 to study the role of MDA5 in T1D. CB4 infection enhances T1D in NODs through activation of autoreactive T cells. We hypothesized that MDA5 signals the strength, polarization and regulation of the T cell response after stimulation by agents like CB4 and dampening MDA5 function would alter the T cell response to favour T1D protection. MDA5ko(-/-) were backcrossed to the NOD background and confirmed by SNP analysis. NOD-MDA5ko(10/10) failed to develop spontaneous T1D by 24 weeks when T1D occurred in MDA5het(+/-)(2/10) and wt(+/+)(9/33). While decreased MDA5 expression (confirmed by Western) in MDA5het did not affect spontaneous T1D, it protected MDA5het(4/4) from CB4 induced T1D compared to infected wt(2/4). FACS analysis revealed significantly fewer activated effector CD4+ T cells in the spleen and PLNs of MDA5hets. Further, MDA5het PLNs had increased numbers of natural Tregs. These results support our premise that reduced MDA-5 expression alters the T cell response limiting the development of autoreactive effectors and T1D and suggests that dampening MDA-5 function could be a key therapeutic target.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.200
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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