MétaCan
Menu
Back to cohort
Record W109454344

Biofilm forming ability and exoproteomic analysis of Listeria monocytogenes

2014· dissertation· en· W109454344 on OpenAlexaboutno aff
António Clara Abreu Afonso Lourenço

Bibliographic record

VenueUniversity of Lisbon Repository (University of Lisbon) · 2014
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial biofilms and quorum sensing
Canadian institutionsnot available
FundersFaculdade de Ciências e Tecnologia, Universidade Nova de LisboaFundação para a Ciência e a Tecnologia
KeywordsBiofilmListeria monocytogenesMicrobiologyPseudomonas aeruginosaBiologyBacteriaCrystal violetStrain (injury)MutantChemistryGeneBiochemistryGenetics
DOInot available

Abstract

fetched live from OpenAlex

The eradication from the food industry environment of the foodborne pathogenic bacterium Listeria monocytogenes requires a better understanding of its biofilm state. The susceptibility of biofilms of L. monocytogenes, in pure and in co-culture with Pseudomonas aeruginosa, to commercial sanitizers was determined using the Calgary Biofilm Device (CBD). Biofilms produced at 12 oC were generally less susceptible to sanitizers than at 37 oC. In co-culture biofilms, L. monocytogenes although representing only 1% of the co-culture, was in the same order of magnitude as the one obtained when in pure culture (5.5 log CFU/cm). In addition to the CBD, three other methods to assess biofilm formation (crystal violet assay, epifluorescence microscopy observation and cell enumeration on stainless steel) were compared. A significant correlation was found between methods using stainless steel, evidence that data is dependent of the surface material. These results also allowed the selection of two good biofilm producing strains to be used for exoproteome investigation. For both strains, 16 identified exoproteins were more abundantly detected in the biofilm exoproteomes compared to the planktonic counterparts. One of these proteins was the putative cell wall binding protein, Lmo2504. The construction of a deletion mutant on its coding gene, confirmed the positive role of this protein in the biofilm forming ability of the wild type strain. This is the first report on the role of the exoproteome in biofilm formation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.279
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.196
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

Explore more

Same venueUniversity of Lisbon Repository (University of Lisbon)Same topicBacterial biofilms and quorum sensingFrench-language works237,207