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Record W1166089223 · doi:10.1134/s2079059715030028

Mapping of the loci controlling the resistance to Pyrenophora teres f. teres and Cochliobolus sativus in two double haploid barley populations

2015· article· en· W1166089223 on OpenAlexaff
О. С. Афанасенко, A. V. Koziakov, P. E. Hedlay, Н. М. Лашина, А. В. Анисимова, Outi Manninen, Marja Jalli, Elena Potokina

Bibliographic record

VenueRussian Journal of Genetics Applied Research · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicWheat and Barley Genetics and Pathology
Canadian institutionsCollège Boréal
FundersJames Hutton Institute
KeywordsCochliobolus sativusQuantitative trait locusBiologyDoubled haploidyPopulationHordeum vulgareGeneticsVeterinary medicineBotanyHorticultureCultivarPoaceaeGene

Abstract

fetched live from OpenAlex

Net blotch of barley ( Hordeum vulgare L.), caused by Pyrenophora teres f. teres , and spot blotch, caused by Cochliobolus sativus , are the most widespread and harmful diseases in the geographic range of the crop. Barley breeding for resistance to these diseases should employ large genetic diversity. The 11_11067 SNP marker was revealed on chromosome 6H position 58 cM in the double haploid (DH) population A developed by crossing the Ethiopian accession k-23874, highly resistant to P. teres f. teres , to the susceptible Pirkka cultivar. It was reliably ( p < 0.05) associated with resistance to three P. teres f. teres isolates. In population B (Zernogradsky 813 (MR to C. sativus ) Ranniy 1 (MR to P. teres f. teres ), 11 QTL controlling resistance to 12 P. teres f. teres isolates were found on all barley chromosomes and 14 QTL for resistance to 12 C. sativus isolates, on all chromosomes except for 4H. For both pathogens, the revealed QTL were shown to be isolate-specific. The majority of the loci detected were mapped in the same intervals between SNP markers where QTL controlling resistance to P. teres f. teres and C. sativus had been found by other scientists. Four novel QTL controlling resistance to P. teres f. teres were found on chromosomes 1H, 4H, and 5H. Five novel QTL associated with resistance to C. sativus were found on chromosomes 2H, 3H, 5H, and 6H in DH population B.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.122
GPT teacher head0.341
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations27
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueRussian Journal of Genetics Applied ResearchSame topicWheat and Barley Genetics and PathologyFrench-language works237,207