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Diets high in saturated fat increase intestinal inflammation associated with IBD via alterations in the microbiota

2010· article· en· W128748914 on OpenAlexaff
Suzanne Devkota, Yunwei Wang, Dion Antonopoulos, Eugene B. Chang

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsInstitute of Nutrition, Metabolism and Diabetes
FundersNational Institutes of Health
KeywordsGut floraInflammationPolyunsaturated fatty acidColitisMedicineProteobacteriaFood scienceSaturated fatMicrobiomeIncidence (geometry)Internal medicineBiologyPhysiologyImmunologyEndocrinologyBacteriaAnimal scienceFatty acidBiochemistryBioinformatics

Abstract

fetched live from OpenAlex

Clinical evidence suggests the chronic inflammation seen in inflammatory bowel diseases (IBD) results from a combination of environmental/microbial factors on a background of genetic susceptibility. This study evaluates the environmental factor of dietary fat composition on the incidence of IBD via alterations in gut microbiota. Male C57bl/6j mice (6 w/o) were fed a high saturated fat (SF; 47% energy from carbohydrates, 16% energy from protein, 37% energy from fat), high polyunsaturated fat (PF; 47:16:37), or a low fat control diet (C; 70:16:14) for 3 wks (n=10/diet). Cecal contents were collected for microbial pyrosequencing of 16s rDNA and revealed a “bloom” of b.wadsworthia, a cytotoxic proteobacteria, only in the SF diet. Body weight was greater on SF diet than PF and LF despite no significant difference in kcals consumed, suggesting an increased microbial capacity for energy harvest on SF, a contributing factor to local inflammation. Next, male IL‐10−/− mice (4 w/o), a model of spontaneous colitis, were fed LF or SF (n=5/diet) for 12 wks. Only 20% of these mice developed colitis on LF vs. 100% on SF accompanied by a 4‐fold increase in pro‐inflammatory IL‐6 and IL‐12 and a microbial profile like that of the C57bl/6j mice fed SF. These data indicate that SF diets create an environment favorable for the growth of harmful bacteria contributing to incidence to IBD. Supported by the National Institutes of Health R01 and T32 Grant Funding Source : National Institutes of Health

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.231
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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