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Record W143366264

Threshold(trade mark) Immunoassays for Identification of Biological Agents: NATO SIBCA Exercise III

2002· article· en· W143366264 on OpenAlexaboutno aff
H. Thompson, R. Elaine Fulton

Bibliographic record

VenueDefense Technical Information Center (DTIC) · 2002
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacillus and Francisella bacterial research
Canadian institutionsnot available
Fundersnot available
KeywordsFrancisella tularensisYersinia pestisVirologyBiological warfareCoxiella burnetiiMicrobiologyBiologyToxicology
DOInot available

Abstract

fetched live from OpenAlex

In February 2001, the NATO Panel VII Subgroup on Sampling and Identification of Biological and Chemical Agents (SIBCA) conducted the third international training exercise on the identification of biological agents. Fourteen NATO national laboratories participated: Austria, Bulgaria, Canada, France, Germany (two laboratories), Italy, the Netherlands, Norway, Poland, Sweden, the United Kingdom and the United States (two laboratories). The designated laboratory for Canada was Defence R&D Canada - Suffield (DRDC Suffield). Participant laboratories were sent seven samples, four liquid (including one buffer blank) and three solid, consisting of soil. Participants were advised that samples could contain any one of the following gamma-irradiated organisms: Bacillus anthracis, Yersinia pestis, Brucella melitensis, Francisella tularensis, Vibrio cholera, Burkholderia mallei; Venezuelan equine encephalitis (VEE) virus, Vaccinia virus, Coxiella burnetti, or Yellow fever virus. A number of immunologically-based technologies were used at DRDC Suffield for screening of sample unknowns, one of which was the Threshold(TM) assay, a Light Addressable Potentiometric Sensor (LAPS) assay. Antigen capture Threshold(TM) assays were available for five biological agents: Bacillus anthracis, Yersinia pestis, Brucella melitensis, Francisella tularensis, and Burkholderia mallet. Two biological agents were identified by Threshold(TM), both from the liquid samples (B. melitensis and F. tularensis). No "false positive" or "false negative" reactions were observed with SIBCA liquid samples. However, soil-extracted samples produced multiple "false positive" reactions and one "false negative" reaction, making identification of agents from this medium impossible to achieve.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.549
Threshold uncertainty score0.601

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.277
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2002
Admission routes1
Has abstractyes

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