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Record W1481320494 · doi:10.1002/ppul.23146

Novel outcome measures for clinical trials in cystic fibrosis

2014· review· en· W1481320494 on OpenAlexaff
Harm A.W.M. Tiddens, Michael Puderbach, José G. Venegas, Félix Ratjen, Scott H. Donaldson, Stephanie D. Davis, Steven M. Rowe, Scott D. Sagel, Mark Higgins, David Waltz

Bibliographic record

VenuePediatric Pulmonology · 2014
Typereview
Languageen
FieldMedicine
TopicCystic Fibrosis Research Advances
Canadian institutionsUniversity of Toronto
FundersNational Center for Advancing Translational SciencesNovartis PharmaDeutsche ForschungsgemeinschaftErasmus Medisch CentrumInsmedBundesministerium für Bildung und ForschungNational Heart, Lung, and Blood InstituteGilead SciencesNational Institutes of HealthVertex PharmaceuticalsPTC TherapeuticsEli Lilly and Company
KeywordsMedicineCystic fibrosisClinical trialIntensive care medicineDiseaseClinical endpointBioinformaticsInternal medicine

Abstract

fetched live from OpenAlex

Cystic fibrosis (CF) is a common inherited condition caused by mutations in the gene encoding the CF transmembrane regulator protein. With increased understanding of the molecular mechanisms underlying CF and the development of new therapies there comes the need to develop new outcome measures to assess the disease, its progression and response to treatment. As there are limitations to the current endpoints accepted for regulatory purposes, a workshop to discuss novel endpoints for clinical trials in CF was held in Anaheim, California in November 2011. The pros and cons of novel outcome measures with potential utility for evaluation of novel treatments in CF were critically evaluated. The highlights of the 2011 workshop and subsequent advances in technologies and techniques that could be used to inform the development of clinical trial endpoints are summarized in this review. Pediatr Pulmonol. © 2014 The Authors. Pediatric Pulmonology published by Wiley Periodicals, Inc.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.040
metaresearch head score (Gemma)0.061
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.960
Threshold uncertainty score0.212

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0400.061
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0070.003
Bibliometrics0.0050.005
Science and technology studies0.0000.002
Scholarly communication0.0030.004
Open science0.0030.002
Research integrity0.0040.006
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.340
GPT teacher head0.541
Teacher spread0.201 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designSystematic review
DomainMethods
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations42
Published2014
Admission routes1
Has abstractyes

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