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Record W1483376079 · doi:10.5772/26580

Anoxia-Induced Suspended Animation in Caenorhabditis elegans

2012· book-chapter· en· W1483376079 on OpenAlexfundno aff
A Ribone Pamela, Jo M., A. Vinita

Bibliographic record

VenueInTech eBooks · 2012
Typebook-chapter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Aging, and Longevity in Model Organisms
Canadian institutionsnot available
FundersNational Institute of General Medical SciencesUniversity of British ColumbiaOklahoma Medical Research FoundationNational Institutes of HealthNational Science Foundation
KeywordsCaenorhabditis elegansBiologyRNA interferenceModel organismFunction (biology)GeneGenetic screenOrganismCell biologyComputational biologyGeneticsRNAMutant

Abstract

fetched live from OpenAlex

Some of the most complex biological processes were first elucidated in somewhat “simple” genetic model organisms. For example, where would we be in our molecular and cellular understanding of gene expression, cell division, embryo development and cell death if it were not for research using E. coli, Yeast, Drosophila and C. elegans? Due to the pioneering work by Sydney Brenner and others, the soil nematode C. elegans is now a well-known genetic and developmental model system (Brenner, 1974). Genetic approaches have contributed significantly to our advanced understanding of the mechanisms regulating gene function, organ development, microRNA function and signaling pathways regulating aging and stress (WormBook). The molecular advances and development of genetic tools such as RNA interference (RNAi) and protein expression analysis with the Green Fluorescent Protein (GFP) were initially worked out in C. elegans and thus firmly established this organism as a cornerstone of genetic models for unraveling the molecular mechanisms of many biological processes (Chalfie and Kain, 2006; Fraser et al., 2000; Jorgensen and Mango, 2002; Timmons and Fire, 1998). Research from many labs have clearly demonstrated that this small soil nematode has contributed significantly to our understanding of biology and that multiple types of molecular tools exist to elucidate mechanistic details. Further examples of the significant impact C. elegans has had in our understanding of biology are the fairly recent Noble Prize awards to six individuals (S. Brenner, M. Chalfie, A. Fire, R. Horvitz, C. Mello, J. Sulston) who made paradigm shifting discoveries using C. elegans. Through the effort of many within the C. elegans community, the molecular tools and genetic resources available in this model system have helped to address and elucidate the molecular mechanisms regulating multiple biological processes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.753
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.001
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.239
Teacher spread0.219 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2012
Admission routes1
Has abstractyes

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