MétaCan
Menu
Back to cohort

Human embryonic larynx morphogenesis: three‐dimensional and multiplanar study (918.26)

2014· article· en· W1484476216 on OpenAlexaboutno aff
Marc Labrouse, Romain Tonnelet, Yohann Renard, Emilien Micard, Fabrice Duparc, V. Delmas, Marc Braun

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCleft Lip and Palate Research
Canadian institutionsnot available
Fundersnot available
KeywordsLarynxAnatomyEpiglottisSegmentationTrichromeMorphogenesisBiologyComputer scienceH&E stainMedicinePathologyArtificial intelligenceStaining

Abstract

fetched live from OpenAlex

The purpose of this study was to describe the human larynx embryology, using three‐dimensional reconstructions from seven human embryos histological sections, and to compare our results with literature. Seven human embryos from two historic French collections (Paris‐Descartes University's Delmas‐Rouvière collection and Rouen University's Tardif collection) stained with hematoxylin & eosin or Masson's trichrome were reclassified according to the Carnegie Atlas criteria (CS (Carnegie stages) 17, 18, 19, 21 and 22). A local made computer software developed by IADI lab (INSERM U947, Nancy) allowed automatic slices selection, automatic rigid registration, and dust filtering. Once registration had been completed, DICOM files were used with ORS Visual software (v1.5, Montreal), which allowed multiple display and post‐processing possibilities (3D VR; orthogonal/curved multiplanar reformation). Due to large size files, image processing was performed on PC with Windows 7 (64 bit) and 20 GB RAM. Three‐dimensional and multiplanar study of the larynx morphogenesis was possible with appropriate thresholding. In the first stages of this study, the early laryngeal aditus was visible. Two posterior elevations, the arytenoid swellings, one anterior, the epiglottis, and the vocal folds were seen in the last stages. Human embryonic larynx morphogenesis works are very rare because of the smallness of this anatomical structure. Our study, using historic human embryos histological sections has shown the larynx growth. This demonstration was completely novel and had never been published previously, to our knowledge. Indeed, our method is fully respectful towards the microscopic structure unlike methods using Amira© segmentation and triangulation process. The precise knowledge of this morphogenesis will help to better understand congenital malformations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.281
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

Explore more

Same venueThe FASEB JournalSame topicCleft Lip and Palate ResearchFrench-language works237,207