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Record W148492412 · doi:10.1096/fasebj.20.4.a496-c

The eIF2α kinase PKR is a negative regulator of Stat1 and Stat3

2006· article· en· W148492412 on OpenAlexafffund
Jennifer F. Raven, Shuo Wang, Shirin Kazemi, Dionissois Baltzis, Maria Hatzoglou, Michel L. Tremblay, Antonis E. Koromilas

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA regulation and disease
Canadian institutionsMcGill UniversityWilliam Osler Health SystemJewish General Hospital
FundersCanadian Institutes of Health ResearchCanadian Breast Cancer Research Alliance
KeywordsProtein kinase RRegulatorKinaseCell biologyChemistryBiologyProtein kinase AMitogen-activated protein kinase kinaseBiochemistryGene

Abstract

fetched live from OpenAlex

Cancerous cells contain overactive proteins, including the transcription factor Stat1, which is hyperphosphorylated in various blood and head and neck cancers. Numerous mechanisms exist which regulate Stat1, including dephosphorylation in the nucleus by the tyrosine phosphatase TC‐PTP. Stat1 activity is further controlled by the eIF2α kinase PKR, which inhibits the formation of Stat1 transcriptional complexes. We set out to determine if an indirect pathway exists that controls Stat1 phosphorylation via PKR. Using an inducible PKR cell line, we demonstrated that tyrosine phosphorylation of Stat1, and a related family member Stat3, is reduced in the presence of active PKR. Targeted reduction of TC‐PTP by RNAi in the same cell line resulted in a partial rescue of Stat1 and Stat3 phosphorylation, transcriptional activity and nuclear localization. PKR exerts this regulation by phosphorylating both TC‐PTP and eIF2α, thus controlling translation. These results describe a previously unknown pathway regulating the activity of Stat1 and Stat3, and also identify a TC‐PTP as a novel substrate of PKR. Since both PKR and Stat1 have anti‐tumour activity, and Stat3 is a proto‐oncogene, further insight into the relationship between these proteins may allow us to comprehend their roles in cancer development and progression. This project was funded by a grant from the CIHR/CBCRA.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.137
Threshold uncertainty score0.183

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.230
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2006
Admission routes2
Has abstractyes

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