MétaCan
Menu
Back to cohort
Record W1497306473 · doi:10.1128/9781555815776.ch13

Molecular Basis of Fungal Adherence to Endothelial and Epithelial Cells

2014· book-chapter· en· W1497306473 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueASM Press eBooks · 2014
Typebook-chapter
Languageen
FieldMedicine
TopicAntifungal resistance and susceptibility
Canadian institutionsMcGill University
Fundersnot available
KeywordsBasis (linear algebra)BiologyMicrobiologyComputational biologyCell biologyChemistryMathematics

Abstract

fetched live from OpenAlex

This chapter focuses on fungal adhesins that have been characterized at the genetic level and that mediate adherence to host constituents. These adhesins include Als proteins, Hwp1p, Eap1p, Csh1p, and other less well characterized proteins. ALS1 is part of a gene family that is characterized by the presence of conserved tandem repeats. The ALS gene family contains at least eight members, ALS1, ALS2, ALS3, ALS4, ALS5, ALS6, ALS7, and ALS9. A comprehensive study of the binding specificity of Als proteins expressed in Saccharomyces cerevisiae found that that Als1p, Als3p, and Als5p mediate adherence to a broad variety of host substrates, including endothelial cells, oral epithelial cells, collagen, fibronectin, and laminin. Fragments of genes with homology to the Candida albicans ALS gene family have been detected in Candida dubliniensis and Candida tropicalis. Several studies have demonstrated that Aspergillus fumigatus conidia and hyphae adhere specifically to a variety of host substrates including laminin, fibrinogen, fibronectin, and pulmonary epithelial cells. The identification and characterization of fungal adhesins have been greatly facilitated by the development of powerful molecular biology tools and the recently completed fungal genome-sequencing projects. Furthermore, many important fungal adhesins will probably be glycosylphosphatidylinositol (GPI)-linked proteins with serine- and threonine-rich tandem repeats in their central domains. Identification of these adhesins is important because it provides insight into the mechanisms of fungal pathogenicity, as well as potential therapeutic targets.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.475
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.263
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it