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Record W1499518160 · doi:10.1002/hup.2233

Association study of <i>GRIK1</i> gene polymorphisms in schizophrenia: case–control and family‐based studies

2012· article· en· W1499518160 on OpenAlexafffund
Yuko Hirata, Clement C. Zai, Renan P. Souza, Jeffrey A. Lieberman, Herbert Y. Meltzer, James L. Kennedy

Bibliographic record

VenueHuman Psychopharmacology Clinical and Experimental · 2012
Typearticle
Languageen
FieldNeuroscience
TopicNeuroscience and Neuropharmacology Research
Canadian institutionsUniversity of TorontoCentre for Addiction and Mental Health
FundersCanadian Institutes of Health ResearchAstraZenecaEli Lilly and CompanyAmerican Foundation for Suicide Prevention
KeywordsSingle-nucleotide polymorphismSchizophrenia (object-oriented programming)HaplotypeDorsolateral prefrontal cortexGenetic associationCase-control studyGeneticsGlutamatergicDISC1Linkage disequilibriumAssociation (psychology)GenePrefrontal cortexGlutamate receptorBiologyMedicineAlleleInternal medicinePsychologyNeuroscienceGenotypePsychiatryReceptorCognition

Abstract

fetched live from OpenAlex

UNLABELLED: Glutamatergic function is one of the major hypotheses for schizophrenia. Within the glutamate system, the glutamate receptor ionotropic kainate-1 (GRIK1) gene is thought to be particularly involved in schizophrenia because of the reported reduction of GRIK1 in the dorsolateral prefrontal cortex of patients. OBJECTIVE: We examined single-nucleotide polymorphisms (SNPs) in the GRIK1 gene for possible association with schizophrenia. METHODS: We analyzed eight SNPs across the GRIK1 gene in 202 case-control pairs and 108 small nuclear families. RESULTS: For the case-control study, we found nominal significant associations in the analysis of rs469472 (p = 0.028) and its haplotypes. In the family-based study, nominal significant association was also observed for rs469472 (p = 0.046), as well as rs455892 (p = 0.024). The marker rs469472 was associated with schizophrenia when we combined the case-control and family samples (p = 0.027). The association findings did not survive correction for multiple testing. CONCLUSIONS: Because we observed similar association findings with marker rs469472 in two independent samples, further analyses in larger samples are warranted.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.012

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.138
GPT teacher head0.476
Teacher spread0.338 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations24
Published2012
Admission routes2
Has abstractyes

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