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PACAP‐regulated phenylethanolamine<i>N</i>‐methyltransferase gene expression

2010· article· en· W1501740227 on OpenAlexaff
T.C. Tai, David C. Wong‐Faull, Robert Claycomb, Jennifer L. Aborn, Dona L. Wong

Bibliographic record

VenueJournal of Neurochemistry · 2010
Typearticle
Languageen
FieldNeuroscience
TopicNeuropeptides and Animal Physiology
Canadian institutionsNOSM UniversityLaurentian University
Fundersnot available
KeywordsMolecular biologyPhenylethanolamine N-methyltransferasePituitary adenylate cyclase-activating peptideBiologyActivator (genetics)Protein kinase APromoterPhenylethanolamineMessenger RNAReceptorChemistryGene expressionGeneKinaseCell biologyBiochemistryEnzymeNeuropeptideVasoactive intestinal peptideTyrosine hydroxylase

Abstract

fetched live from OpenAlex

Pituitary adenylate cyclase activating polypeptide (PACAP) induces the proximal -893 bp of rat phenylethanolamine N-methyltransferase (PNMT) gene promoter in PC12 cells via PACAP type I receptors. Deletion mutation analysis suggested that the initial -392 bp of promoter, containing early growth response protein (Egr-1), specificity protein 1 (Sp1) and activator protein 2 (AP-2) binding sites (-165, -168 and -103 bp, respectively), was sufficient for PACAP activation. Egr-1 and AP-2 involvement was supported by PACAP induction of their mRNA and protein. Mutation of the Egr-1, Sp1 and AP-2 elements showed that the Egr-1 site was essential for PACAP stimulation. Mutation of the -103 bp AP-2 site partially reduced PACAP activation of the promoter. Mutation of two upstream AP-2 sites at -573 and -650 bp, separately or in tandem, also prevented promoter induction by PACAP. siRNA knock-down of Egr-1 and AP-2 suppressed promoter activation for the -893 bp construct. Egr-1 siRNA knock-down also eliminated the residual activation observed for the -103 bp AP-2 mutant construct, suggesting that Egr-1 and AP-2 through respective -165 and -650/-573/-103 bp sites cooperatively stimulate the promoter. PACAP responses appear orchestrated through cAMP-protein kinase A and phospholipase C signaling as MDL12,330A, H89 and U73122, respectively, inhibited promoter induction by PACAP and reduced PACAP-stimulation of Egr-1, AP-2 and PNMT mRNA and protein and Egr-1 and AP-2 protein/DNA complex formation. Findings are the first to show that PACAP stimulates PNMT promoter-driven gene expression via PACAP type I receptors and cAMP-protein kinase A and phospholipase C signaling, recruiting Egr-1 and AP-2 as cooperative regulators, and the first to associate the transcription factor AP-2 to PACAP-mediated gene induction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.243
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2010
Admission routes1
Has abstractyes

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