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MicroRNA‐301a Alters Dicer Expression in Primary Human Atrial Cells and Bone Marrow‐Derived Mesenchymal Progenitor Cells: Implications for Cardiac Fibrosis

2015· article· en· W1505044211 on OpenAlexaff
Alison Müller, Darren H. Freed

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicExtracellular vesicles in disease
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsDicermicroRNAPhenotypeMyofibroblastProgenitor cellCardiac fibrosisBiologyCell biologyFibrosisMesenchymal stem cellCell typeCellBone marrowTransfectionPathologySmall interfering RNAMedicineImmunologyStem cellCell cultureGeneGenetics

Abstract

fetched live from OpenAlex

It is known that multiple cell types can contribute to cardiac fibrosis including both atrial fibroblasts (AFs) and bone marrow‐derived progenitor cells (MPCs). We have previously shown that MPCs display a myofibroblast phenotype in vitro that is linked to altered microRNA(miR)‐301 expression, a miR affiliated with maintaining proliferation in many cell types. We have also shown that miR‐301a influences a dichotomous phenotype in MPCs isolated from patients undergoing open heart surgery. The objective of this experiment was to further understand how this phenotype change may be influenced. We performed a microarray analysis investigating potential targets of miR‐301a. From this screen, Dicer was identified as a potential target of mir‐301a. Dicer is responsible for activating miRs in the cell, therefore altering protein expression and ultimately influencing phenotype. As both MPCs and AFs display a dichotomous phenotype where each cell type displays a phenotype that pathologically contributes to fibrosis, we transfected both MPCs and AFs with miR‐301a. AFs were also isolated from patients undergoing open heart surgery. We performed qRT‐PCR analysis and found that the mRNA of Dicer was significantly reduced in transfected cells, and observed decreases in levels of both mRNA and protein of collagen I and non‐muscle myosin IIA (NMMIIA). These proteins are present in myofibroblasts, the cell type predominantly responsible for causing cardiac fibrosis. Our results provide insight into a possible cellular mechanism that governs the pro‐fibrotic phenotypes of AFs and MPCs, which could be partially caused by altered Dicer expression with its attendant effect on miRNA processing in the cell.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.263
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2015
Admission routes1
Has abstractyes

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