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Record W1514107135

Building Systematic Reviews Using Automatic Text Classification Techniques

2010· article· en· W1514107135 on OpenAlexaff
Oana Frunza, Diana Inkpen, Stan Matwin

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldComputer Science
TopicAdvanced Text Analysis Techniques
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsComputer scienceWorkflowExploitClassifier (UML)Process (computing)Protocol (science)Data miningMachine learningSystematic reviewArtificial intelligenceData scienceInformation retrievalMEDLINEDatabase
DOInot available

Abstract

fetched live from OpenAlex

The amount of information in medical publications continues to increase at a tremendous rate. Systematic reviews help to process this growing body of information. They are fundamental tools for evidence-based medicine. In this paper, we show that automatic text classification can be useful in building systematic reviews for medical topics to speed up the reviewing process. We propose a per-question classification method that uses an ensemble of classifiers that exploit the particular protocol of a systematic review. We also show that when integrating the classifier in the human workflow of building a review the per-question method is superior to the global method. We test several evaluation measures on a real dataset. 1

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.035
metaresearch head score (Gemma)0.135
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.965
Threshold uncertainty score0.188

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0350.135
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0030.004
Bibliometrics0.0200.010
Science and technology studies0.0020.001
Scholarly communication0.0040.005
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0040.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.056
GPT teacher head0.361
Teacher spread0.305 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designSimulation or modeling
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2010
Admission routes1
Has abstractyes

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