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Parasite species richness in New Zealand fishes: a grossly underestimated component of biodiversity?

2004· article· en· W1515694232 on OpenAlexaboutno aff
Robert Poulin

Bibliographic record

VenueDiversity and Distributions · 2004
Typearticle
Languageen
FieldEnvironmental Science
TopicParasite Biology and Host Interactions
Canadian institutionsnot available
FundersRoyal Society
KeywordsSpecies richnessFaunaBiologyEcologyBiodiversityFreshwater fishPhylogenetic diversityParasite hostingSpecies diversityHost (biology)Coastal fishGlobal biodiversityFish <Actinopterygii>FisheryPhylogenetic treeCoral reef fishCoral reef

Abstract

fetched live from OpenAlex

ABSTRACT Estimates of total parasite species richness, for given host groups in given geographical areas, are always much higher than the numbers of known parasite species on which they are based. The discrepancy is a reflection of our limited current knowledge of parasite diversity. This is illustrated by a comparison of the parasite faunas of New Zealand fish species with those of Canadian fish; the latter have been well studied by fish parasitologists, and provide a standard for comparisons. More parasite species are known per host species for Canadian fish than for New Zealand fish, for both marine and freshwater fishes. This difference remains after correcting for differences in study effort, i.e. in the number of published studies per fish species. There are also more parasite species per fish species in Canada than in New Zealand when parasite species richness is expressed as number of species per unit of host body length. For freshwater fish, the difference can be explained by the restricted phylogenetic origins and geographical isolation of New Zealand fish species. For marine fish, however, there is no a priori reason to expect a difference in parasite species richness between fish in New Zealand and Canadian waters, and the observed difference probably results from a lack of appropriate parasitological surveys in New Zealand. If the true species richness of the parasite faunas of New Zealand marine fish species approaches that of their Canadian counterparts, then most of the diversity and ecosystem function of fish parasites in New Zealand remains unknown.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.164
Threshold uncertainty score0.326

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.002
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.268
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations36
Published2004
Admission routes1
Has abstractyes

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