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Pulmonary expression and regulation of Cldn6 by tobacco smoke (834.3)

2014· article· en· W1520351241 on OpenAlexaboutno aff
Felix R. Jimenez, Josh Lewis, Samuel T. Belgique, Tyler Wood, Paul R. Reynolds

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldMedicine
TopicChronic Obstructive Pulmonary Disease (COPD) Research
Canadian institutionsnot available
Fundersnot available
KeywordsClaudinCOPDTobacco smokeLungParacellular transportRespiratory epitheliumA549 cellImmunofluorescenceSmokeTight junctionInflammationParenchymaPathologyImmunologyEpitheliumBiologyMedicineCell biologyChemistryInternal medicineGeneticsAntibodyEnvironmental health

Abstract

fetched live from OpenAlex

Smoking is a major risk factor for several chronic diseases including chronic obstructive pulmonary disease (COPD), a condition involving both emphysema and inflammation of the airways. COPD severity directly relates to abnormalities of pulmonary epithelial cells. Claudins contribute to tight junctions that prevent paracellular transport of extracellular fluid and diverse substances and Claudin 6 (Cldn6) is a protein expressed prominently in the lung parenchyma. To determine whether Cldn6 was differentially influenced by tobacco smoke, Cldn6 was evaluated by q‐PCR, immunoblitting, and immunofluorescence following exposure to tobacco smoke. Q‐PCR and immunoblotting revealed that Cldn6 was increased in alveolar type II‐like epithelial cells (A549) but not in Bease2B cells, a cell line derived from proximal airway epithelium. Luciferase assays incorporating 0.5kb, 1.0kb, or 2.0kb of the Cldn6 promoter also revealed increased transcription of the gene when cells were exposed to cigarette smoke extract. Cldn6 was also markedly increased in the lungs of Balb/C mice exposed to tobacco smoke delivered by an automated smoke machine (InExpose, Scireq, Canada) compared to animals exposed to room air. These data reveal for the first time that tight junctional proteins are differentially regulated by tobacco smoke exposure and that Cldns are potentially involved as neighboring epithelial cells respond to tobacco smoke. Further research may show that complexes between cells contribute to impaired structural integrity of the lung coincident with smoking. Grant Funding Source : Supported by the Flight Attendant’s Medical Research Institute (FAMRI) and a BYU MEG Award (PRR).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.277
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2014
Admission routes1
Has abstractyes

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