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Defining the mechanisms by which palmitoylation regulates the localization and function of RGS4

2010· article· en· W153683884 on OpenAlexaffabout
Kaveesh Dissanayake, Guillaume Bastin, Scott P. Heximer

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicReceptor Mechanisms and Signaling
Canadian institutionsHeart and Stroke FoundationUniversity of Toronto
Fundersnot available
KeywordsPalmitoylationHEK 293 cellsHeterotrimeric G proteinCell biologyTransfectionG proteinBiologyChemistrySignal transductionBiochemistryCysteineReceptorGeneEnzyme

Abstract

fetched live from OpenAlex

Regulators of G‐Protein Signalling (RGS) proteins are strong candidates for modulating cardiovascular signalling based on their high expression in cardiac and sinoatrial node myocytes, and their ability to potently inhibit heterotrimeric G‐proteins. RGS4 regulates G‐protein function at the plasma membrane (PM) and it has been demonstrated that palmitoylation, the post‐translational addition of a 16 carbon palmitate group to cysteine, is important for RGS4 translocation to the PM. Confocal microscopy data demonstrated that mutation of cysteine residues 2 and 12 removed RGS4 localization to the PM. Calcium imaging confirmed that RGS4‐C2A,C12A elicited less inhibition of Gq‐dependent calcium release than wildtype in HEK293T cells. A library of 23 mammalian palmitoyl‐acyl transferase enzymes has been cloned and isolated, each sharing a conserved catalytic Asp‐His‐His‐Cys (DHHC) site [Fukata et al, 2006]. We set out to establish the DHHC isoforms that regulate the localization and function of RGS4 in HEK cells. We created dominant negative mutations of five DHHCs most highly expressed in HEK cells. Confocal microscopy data showed that co‐transfection of mutant DHHCs 3 and 7 with RGS4 removed localization of RGS4 to the PM. Further studies will examine changes in Gq‐dependent calcium release following transfection of RGS4 in HEK cells where target DHHCs are knocked down using siRNAs. This study was funded by the Heart and Stroke Foundation of Ontario Grant‐in‐Aid Program grants T6799 and the Heart and Stroke/Richard Lewar Centre of Excellence Studentship Award.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.201
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes2
Has abstractyes

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