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The role of miR‐301a and the influence of extracellular environment surface tensions on the dichotomous phenotype shown in primary human bone marrow‐derived mesenchymal stem cells (868.4)

2014· article· en· W1539424120 on OpenAlexaff
Alison Müller, Yun Li, Jessica Klassen, Darren H. Freed

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldMedicine
TopicTissue Engineering and Regenerative Medicine
Canadian institutionsCanadian VIGOUR CentreSt. Boniface HospitalUniversity of Manitoba
Fundersnot available
KeywordsMesenchymal stem cellExtracellular matrixCell biologyFibronectinPhenotypeBone marrowBiologymicroRNAOsteopontinStem cellImmunologyGeneticsGene

Abstract

fetched live from OpenAlex

It has been established that the microenvironment of mesenchymal stem cells (MSCs) is influential in determining differentiation. Expression of non‐coding RNAs, such as microRNAs, has been found to be altered in response to various stimuli and may thus contribute to stem cell differentiation. Previous research in our lab has shown that miR‐301a mediates a dichotomous phenotype in primary human MSCs. As MSCs have been found to directly contribute to cardiac remodeling post‐MI, we sought to understand how migration from bone marrow to cardiac tissue could influence MSC differentiation. The objective of this study is to analyze how varying matrix stiffness would influence miR‐301a expression and MSC differentiation. We analyzed mRNA levels of c‐kit, Dicer, MYH9 and 10 and found that these have increased expression on fibronectin‐coated 2kPa plates simulating native bone marrow stiffness, however this is blunted on 15kPa plates, simulating left ventricle myocardium stiffness. When over‐expressing miR‐301a, we found that there is a significant decrease in c‐kit, Dicer, MYH9 and 10. Interestingly, after quantifying miR‐301a expression on these coated plates we found that there is a substantial increase on 15kPa fibronectin‐coated plates. These observations indicate that matrix stiffness may be influencing MSC differentiation via miR‐301a.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.201
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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