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Distinguishing differences between intrinsic aerobic capacity and age: a 1H‐NMR metabolomics approach (884.19)

2014· article· en· W1555438838 on OpenAlexafffundabout
Jane Shearer, Oluyemi S. Falegan, Russell T. Hepple, Dustin S. Hittel, Lauren G. Koch, Britton Steven, Hans J. Vogel

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMetabolomics and Mass Spectrometry Studies
Canadian institutionsMcGill UniversityUniversity of Calgary
FundersAlberta Cancer Foundation
KeywordsMetabolomicsTaurineValineSarcosineAerobic capacityMetabolomeMetaboliteChemistryInternal medicineBiochemistryBiologyMedicineAmino acidBioinformaticsGlycine

Abstract

fetched live from OpenAlex

Differences in intrinsic aerobic capacity play a critical role in the development of perturbed metabolism, chronic disease and all‐cause mortality. Aims were to employ metabolomics to examine differences in age vs. aerobic capacity in young and old rats selectively bred for low (LCR) or high (HCR) aerobic capacity. Proton nuclear magnetic resonance spectroscopy (1H‐NMR) evaluated the metabolic profile of plasma samples obtained from fasted LCR and HCR. Multivariate statistical analysis was employed, with individual features judged based on variability R2 and predictive ability Q2 in unsupervised and supervised models built using the most significant metabolites. Taurine, pyruvate, acetone, valine, amongst others were key metabolites that contributed to distinct separation based on age (R2=0.83, Q2=0.65). In contrast, weaker predictive models were observed for LCR vs. HCR with scores of R2=0.53 and Q2=0.35 respectively. Key metabolites that decreased in HCR compared to LCR included isopropanol, o‐acetylcarnithine, sarcosine and proline. Pathway analysis highlighted changes in methionine, purine and TCA cycle intermediates. In conclusion, metabolomics analysis was a better predictor and age rather than aerobic capacity in LCR and HCR rats. This observation highlights the importance of age when attempting to isolate metabolic changes in aerobic capacity and their relation to chronic disease risk. Grant Funding Source : Supported by the Alberta Cancer Foundation

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.237
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes3
Has abstractyes

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