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A comparison of a discovery‐based and an event‐based method of historical biogeography

2001· article· en· W1565171720 on OpenAlexafffund
Daniel R. Brooks, Deborah A. McLennan

Bibliographic record

VenueJournal of Biogeography · 2001
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsUniversity of Toronto
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsVicarianceBiological dispersalBiogeographyGenetic algorithmEcologyDivaBiologyCladePhylogenetic treeGeography

Abstract

fetched live from OpenAlex

Aim The event‐based method Dispersal‐Vicariance Analysis (DIVA) is compared with the discovery‐based method Brooks Parsimony analysis (BPA). Location South‐western USA, Mexico and northern Central America. Methods Results of DIVA of phylogenetic trees for six clades of birds inhabiting seven areas in the south‐western US, Mexico and northern Central America are compared with those of BPA for the same data set. Results Both approaches identify the same vicariant elements but differ in the way they treat dispersal. DIVA places such elements in one general ‘dispersal’ category, while BPA identifies different forms of dispersal, including peripheral isolates speciation (speciation by dispersal), post‐speciation dispersal, non‐response to a vicariance event, secondary contact between congeners (and the potential for reinforcement completing speciation) and potential extinction resulting from competition between a resident and a colonizing congener. Main conclusions BPA is more sensitive than DIVA with respect to the different possible manifestations of geographical dispersal. Despite substantial dispersal, avian communities in these areas manifest substantial historical structuring.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.030
Threshold uncertainty score0.418

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.317
Teacher spread0.299 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations54
Published2001
Admission routes2
Has abstractyes

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