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Late-breaking abstract: The bromodomain-containing protein 4: The epigenetic origin of the oncogenic signature in pulmonary hypertension

2014· article· en· W1575036776 on OpenAlexaff
Mylène Vaillancourt, Jolyane Meloche, Pasquale Ferraro, Steeve Provencher, Sébastien Bonnet

Bibliographic record

VenueEuropean Respiratory Journal · 2014
Typearticle
Languageen
FieldMedicine
TopicPeptidase Inhibition and Analysis
Canadian institutionsUniversité de MontréalUniversité LavalInstitut universitaire de cardiologie et de pneumologie de Québec
Fundersnot available
KeywordsDownregulation and upregulationCancer researchBRD4SurvivinEpigeneticsBromodomainMedicineDNA damageDNA methylationApoptosisTranscription factorCell biologyBiologyCancerInternal medicineGene expressionGeneticsDNA

Abstract

fetched live from OpenAlex

Background: As in cancer, pulmonary arterial hypertension (PAH) is associated with sustained DNA damage accounting for a PARP-1-dependent downregulation of miR-204. By an unknown mechanism, miR-204 promotes the expression of several oncogenes implicated in PAH including Survivin, Bcl-2, Pim-1 and c-Myc. Once activated, by affecting the mitochondrial function through the transcription factor NFAT, they contribute to the pro-proliferative and anti-apoptotic phenotype of PAH-pulmonary arterial smooth muscle cells (PASMC). In cancer, studies demonstrated that the epigenetic reader Bromodomain-containing protein 4 (BRD4) increases transcription of multiple oncogenes sustaining cell proliferation. Interestingly, BRD4 is upregulated by DNA damage and is a predicted target of miR-204. We hypothesized that the PARP-1/miR-204-dependent upregulation of BRD4 triggers the oncogenes-dependent pro-proliferative and anti-apoptotic phenotype seen in PAH-PASMC. Method/Results: BRD4 is upregulated in lungs, distal PAs and PASMC of PAH patients compared to healthy donors. This increase is miR-204 dependent, as miR-204 upregulation in PAH-PASMC decreases BRD4. BRD4 activation induces Bcl2, Survivin, c-Myc and Pim1 expression, leading to mitochondrial hyperpolarization (TMRM) and NFAT activation in PAH-PASMC, all of which were reversed upon molecular (siRNA) and pharmacological (JQ1 and I-BET) BRD4 inhibition. Finally, BRD4 inhibition reverses PAH-PASMC proliferation (Ki67) and resistance to apoptosis (TUNEL). Conclusion: Our study suggests an important role for BRD4 in pulmonary hypertension and opens the door to new avenues of investigation and proposes BRD4 as putative treatment for PAH.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.040

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0120.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.252
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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