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A conserved ER‐membrane complex facilitates phospholipid exchange between the ER and mitochondria (758.5)

2014· article· en· W1580149446 on OpenAlexaff
Sujoy Lahiri, Jesse T. Chao, Shabnam Tavassoli, Andrew K. Wong, Barry P. Young, Christopher Loewen, William A. Prinz

Bibliographic record

VenueThe FASEB Journal · 2014
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsMitochondrionCell biologyEndoplasmic reticulumPhosphatidylethanolamineMembrane contact siteOrganelleInner mitochondrial membraneBiogenesisBiologyChemistryPhospholipidBiochemistryMembrane proteinIntegral membrane proteinMembranePhosphatidylcholine

Abstract

fetched live from OpenAlex

The objective of this study is to find the mechanism of lipid exchange between the endoplasmic reticulum (ER) and mitochondria. Mitochondrial membrane biogenesis and lipid metabolism require phospholipid transfer from the ER to mitochondria. Transfer is thought to occur at regions of close contact of these organelles and to be nonvesicular, but the mechanism is not known. Here we used a novel genetic screen in S. cerevisiae to identify mutants with defects in lipid exchange between the ER and mitochondria. We show that a strain missing multiple components of the conserved ER‐membrane proteins complex (EMC) has decreased phosphatidylserine (PS) transport from the ER to mitochondria. Mitochondria from this strain have significantly reduced levels of PS and its derivative phosphatidylethanolamine (PE). Cells lacking EMC proteins and the ER‐mitochondria tethering complex called ERMES (the ER‐mitochondria encounter structure) are inviable, and PS transfer to mitochondria is dramatically reduced, suggesting that the EMC also functions as a tether. These defects are corrected by expression of an engineered ER‐mitochondrial tethering protein that artificially tethers the ER to mitochondria. EMC mutants have a significant reduction in the amount of ER associated with mitochondria, even though ERMES remained intact in these mutants, suggesting that the EMC performs an additional tethering function to ERMES. We find that the EMC interacts with the mitochondrial TOM complex protein, Tom5, and this interaction is important for PS transfer and cell growth, suggesting that the EMC forms a tether with the TOM complex. Together, our findings support that the EMC tethers ER to mitochondria, which is required for phospholipid synthesis and cell growth. Grant Funding Source : NIDDK intramural research program

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.250
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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