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SIDEROPHORE-INDEPENDENT IRON UPTAKE BY IRON-LIMITED CELLS OF THE CYANOBACTERIUM ANABAENA FLOS-AQUAE1

2010· article· en· W1584199746 on OpenAlexaff
Nikki L. Wirtz, Ron G. Treble, Harold G. Weger

Bibliographic record

VenueJournal of Phycology · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPhotosynthetic Processes and Mechanisms
Canadian institutionsUniversity of Regina
Fundersnot available
KeywordsSiderophoreCyanobacteriaChelationBiologyAnabaenaFerritinBiochemistryEthylenediamineBacteriaChemistryInorganic chemistryGene

Abstract

fetched live from OpenAlex

Iron acquisition by iron-limited cyanobacteria is typically considered to be mediated mainly by siderophores, iron-chelating molecules released by iron-limited cyanobacteria into the environment. In this set of experiments, iron uptake by iron-limited cells of the cyanobacterium Anabaena flos-aquae (L.) Bory was investigated in cells resuspended in siderophore-free medium. Removal of siderophores decreased iron-uptake rates by ∼60% compared to siderophore-replete conditions; however, substantial rates of iron uptake remained. In the absence of siderophores, Fe(III) uptake was much more rapid from a weaker synthetic chelator [N-(2-hydroxyethyl)ethylenediamine-N,N′,N′-triacetic acid (HEDTA); log Kcond = 28.64 for Fe(III)HEDTA(OH)−] than from a very strong chelator [N,N′-bis(2-hydroxybenzyl)-ethylenediamine-N,N′-diacetic acid (HBED); log Kcond = 31.40 for Fe(III)HBED−], and increasing chelator:Fe(III) ratios decreased the Fe(III)-uptake rate; these results were evident in both short-term (4 h; absence of siderophores) and long-term (116 h; presence of siderophores) experiments. However, free (nonchelated) Fe(III) provided the most rapid iron uptake in siderophore-free conditions. The results of the short-term experiments are consistent with an Fe(III)-binding/uptake mechanism associated with the cyanobacterial outer membrane that operates independently of extracellular siderophores. Iron uptake was inhibited by temperature-shock treatments of the cells and by metabolically compromising the cells with diphenyleneiodonium; this finding indicates that the process is dependent on active metabolism to operate and is not simply a passive Fe(III)-binding mechanism. Overall, these results point to an important, siderophore-independent iron-acquisition mechanism by iron-limited cyanobacterial cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.035
Threshold uncertainty score0.471

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.211
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2010
Admission routes1
Has abstractyes

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