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Influenza A Virus Infects Human Mast Cells and Increases Expression of Antiviral Genes (133.43)

2009· article· en· W159536703 on OpenAlexaff
Candy Marcet, Chris St. Laurent, Nav.T. Singh, A. Dean Befus

Bibliographic record

VenueThe Journal of Immunology · 2009
Typearticle
Languageen
FieldMedicine
TopicRespiratory viral infections research
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsBiologyVirusVirologyViral replicationGeneImmune systemCell cultureMolecular biologyRNAInnate immune systemImmunologyGenetics

Abstract

fetched live from OpenAlex

Abstract Evidence is building for the role of mast cells (MC) in innate immune responses against various pathogens. In the lungs, MC exist close to epithelial cells (EC), where influenza A virus (FluA) primarily replicates. Viruses such as dengue virus and HIV are capable of replicating in MC, but no report of FluA replication in MC currently exists. Our aim was to characterize FluA infection in human MC and examine host factors in MC that might regulate virus replication. Human MC lines (HMC1 and LAD2) and primary MC cultured from human peripheral blood (PBMC) were exposed to FluA (PR/34/8, 20HAU/ml). EC lines (MDCK and Calu-3) were used as comparative cell types. The presence of RNA viral transcripts by RT-PCR followed similar time courses in MC and EC. Supernatants were harvested at various time points after infection. Total FluA parcticles as determined by ability to agglutinate red blood cells was significantly lower (p<0.05) in MC (27 ± 13 HAU/ml) than in EC (480 ± 160 HAU/ml) at 4 days after infection. Infectious FluA particles as determined by ability of supernatants to infect Calu-3 were detected from EC but not MC. Since FluA replication was diminished in MC compared to EC, we explored whether MC express and/or upregulate antiviral genes in response to FluA. We have data that RNA transcripts of antiviral genes, such as nitric oxide synthase 3 and protein kinase R, are increased in MC exposed to FluA. Our evidence suggests that MC have antiviral mechanisms to restrict FluA replication, which may contribute to host immunity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.357
Teacher spread0.318 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2009
Admission routes1
Has abstractyes

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