Characterization of human soluble Tim-3 and its role in HIV infection (VIR1P.1002)
Bibliographic record
Abstract
Abstract Chronic Human Immunodeficiency Virus Type-1 (HIV) infection results in a loss of HIV-specific CD8+ T cell effector function, termed “exhaustion”, which is mediated, in-part, by the co-inhibitory receptor T-cell immunoglobulin mucin domain-containing protein 3 (Tim-3). Like many other receptors, a soluble form of this protein has been described in human blood plasma. However, this soluble Tim-3 (sTim-3) is poorly characterized and it’s unclear whether it plays a role in HIV pathogenesis. Using a Tim-3 ELISA, we found that levels of sTim-3 were significantly elevated in HIV+ antiretroviral treatment naïve patient plasma compared to healthy controls or HIV+ antiretroviral treated patients, and significantly correlated positively with viral load but not with CD4+ T cell counts. To characterize this construct, we immunoprecipitated the protein from HIV+ patient plasma; western blotting analysis revealed that plasma sTim-3 is the approximate size of the Tim-3 ectodomain. Following detection of sTim-3 from activated PBMCs in culture, no alternatively spliced Tim-3 constructs were observed, however, levels of sTim-3 were abrogated with the inclusion of a matrix metalloproteinase, ADAM10, inhibitor. Further, we showed that this sTim-3 was produced from activated T cells treated with an ADAM10 agonist and was the approximate size of plasma sTim-3. Our results suggest that increasing levels of viral antigen result in increased Tim-3 shedding from the T cell surface during HIV infection.
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.001 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.000 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".